Agelaius tricolor (tricolored blackbird): 139603118
Help
Entry
139603118 CDS
T10815
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139603118 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139603118 (DROSHA)
03009 Ribosome biogenesis [BR:
atrc03009
]
139603118 (DROSHA)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139603118 (DROSHA)
Enzymes [BR:
atrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
139603118 (DROSHA)
Messenger RNA biogenesis [BR:
atrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
139603118 (DROSHA)
Ribosome biogenesis [BR:
atrc03009
]
Eukaryotic type
90S particles
RNase
139603118 (DROSHA)
Prokaryotic type
rRNA processing factors
139603118 (DROSHA)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
139603118 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
139603118
NCBI-ProteinID:
XP_071309687
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSAQTYRPQNLRQLHPQQPSVQYQYEQQTAPPTTYSNPPAT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPTPPPVPNPSN
TPVPGTPAGQSTFPYMMPPPTVPHPPPPPVMPQQVSYQPVYSAGYSQQSFPPPSFNSYQH
SSGSFPSSTASNSAGSSHFRHTGQYQGEKSQSERRSPDRSKHYDEHRHREHGHMHGDRHR
SANHGDRRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERNRERERERHRHRDSRRSP
SPDRSYKKDYKRAGSRSPSRERKRTRWEEDRERWSENQSSSKEKNYTAVKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESECDSEDDSSCSSSSDSDVIDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSISCPRYHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHIHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELERFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNEKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVTLRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKELRWE
REHQERESEETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtccccgtggccaggggggaccaggagcaagaact
tcagcacagacctaccgccctcagaacctgcggcagcttcacccacagcagccctccgtg
cagtaccagtatgagcagcaaactgcccctccaacaacctactccaaccctcccgccacc
ggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccaccatttccaaaccaccagatgcggcag
agcttcccagtgcctccatgtttccctcccactcctccaccagtgccaaaccctagcaac
actcccgtgccaggaacacctgctggacaaagcacctttccttacatgatgcctcccccc
acagtaccacaccctcccccgccgccagtcatgccacagcaggtcagctaccagcccgtg
tactcggcgggctactcgcagcagtccttcccgccgcccagcttcaacagctaccagcac
agctccggctccttcccgagcagcactgccagcaacagcgccggcagcagccacttccgg
cacacggggcagtaccagggagagaagtcccaaagtgagcggcgctccccggacaggagc
aagcactacgatgagcaccggcaccgcgagcacgggcacatgcacggcgacaggcaccgc
tccgctaaccacggggatcgtcgggatcgcggccgcagtccggataggaggaggcaggaa
agcagtcggcaccggacggattatgacagaggaaggatatcgcctcatcacagaagttac
gagcgaaacagggagcgggagagggagaggcatcgtcaccgtgacagcagaagatcacca
tcaccagacagatcctacaaaaaggattacaagagagcaggaagccggtctccaagcaga
gagagaaagagaacccggtgggaggaggacagagaaaggtggtctgagaaccagagctcc
agtaaagagaaaaattatactgctgtcaaagacaaagaatcagaagagaatgcatcagaa
aaaaatgaagaggaagatgaggaattgcttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctccgggatctgtatgaaaagtttgatgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccaaaaactaagctggatgaagatttagag
agctccagtgagtcagagtgtgactccgaagatgacagcagctgttccagcagttcagat
tcggatgttattgacgtcattgcggaaattaagcgtaaaaaagcacaccctgatcgtctc
cacgaggaattgtggtacaatgatcccggacagatgaatgatggacctttgtgcaaatgc
agtgctaaagcccggcgaacaggaatcagacatggcatttatcctggtgaagagcccatt
aaaccatgtcgtcccatgaccaacaatgctggaagactataccactaccgaattactgtg
tcaccccccacaaatttcttaacagacagacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctccatgtttgcacacgccccgctgacaaacattcctctatgc
aaagtaatcaggtttaacattgactatacaattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggccttgaactgttctcttcatatctattcaaagatattttggaa
ttgtatgactggaatcttaaaggtccttcacttgaaaatgattctatttcctgtcccaga
taccacttcatgccgcggtttgtgagatttctcccagatggaggaaaagaagtactctca
atgcatcagattcttctctacttgttacgatgcagtaaagctctggtgcctgaagaggag
attgctaacatgcttcagtgggaagaactggaatggcagaaatatgcagaagaatgcaaa
gggatgatcgttaccagccctggcatgaaacccagctcagttcgtattgatcaactagac
cgcgaacaattcaatcctgatgtaattaccttccctattattgtgcactttgggatacga
cctgcacaactcagttatgctggagatcctcaataccaaaagctgtggaagagttacgtg
aagctgcgtcacctgctggctaatagtcccaaagtcaaacaggctgataaacagaaatta
tcacaaagagaggaagcactgcagaaaattcgccagaagaacacaatgagacgtgaagtg
actgtggagttgagcagccagggcttctggaaaacagggatacgctctgatgtctgccag
catgcaatgatgcttcctgtcctcacccaccatgtccgctaccatcagtgtctgatgcac
ttggacaaattgataggctacacttttcgagataggtgcttgctgcagcttgccatgact
cacccaagccatcatttaaattttgggatgaatccggatcatgccagaaattccttatcc
aactgtgggattcgacagcccaagtatggagatagaaaagttcaccatatacacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttc
ttaacaagtgtccacttatactacctgtttcccactctggaggaaggaggattagctacg
taccgcactgccatcgtacagaatcagcacctggccatgctggctaagaagctggaactg
gaacgattcatgctctatgctcatggtccagacctttgcagggagtcagatctccgccat
gctatggcaaactgctttgaagccctcataggagctgtttatctagagggaagcctagaa
gaagcaaaacaattatttggacgtttgctcttcaatgaaaaggacctgcgggatgtatgg
cttaattatccattacacccactccaactgcaggagtccaatactgacaggcaactcatt
gagacctctccagttcttcaaaagcttacggagtttgaggaggcaattggagtcatcttt
actcacgttcgacttctagcacgtgcattcactctgaggacagtaggctttaaccatctg
actctaggccacaaccagaggatggaattcctgggtgactccataatgcagttggtagcc
acagagtatttattcatacatttccctgatcatcatgaagggcacttaacgctgttgaga
agttctttggtgaacaacaggacacaggccaaggtggcagaagagctgggcatgcaagag
tttgccatcactaacgacaagacaaaaagacctgtaactcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctgtacattgataaagatttggaatacgttcac
actttcatgaatgtttgcttttttccacggctaaaggagtttattttaaatcaagattgg
aatgatcctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagag
ccggacattcctctctacaagaccctgcagacagtgggaccttctcatgccaggacatac
acagtagctgtctacttcaaaggggaaagaataggatgtggtaaaggtccaagtattcag
caagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaagtacagacaagagttgaaagaattgaggtgggaa
agagagcatcaagagagagagtcagaggagactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
