Agelaius tricolor (tricolored blackbird): 139603188
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Entry
139603188 CDS
T10815
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04020
Calcium signaling pathway
atrc04080
Neuroactive ligand-receptor interaction
atrc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139603188 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139603188 (GRIN1)
04082 Neuroactive ligand signaling
139603188 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139603188 (GRIN1)
Ion channels [BR:
atrc04040
]
Ligand-gated channels
Glutamate (ionotropic)
139603188 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
139603188
NCBI-ProteinID:
XP_071309813
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEDSLPAPGAERGRAPRPAAPAPWRLVL
PACANQPCRMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGG
DACVPHRQLLQLE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctcctcttctcctcgtccttcgcccgcgcc
ggctgcgacccgaagatcgtcaatatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccctgtccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacctgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatactctgataagagcatccacctgtcctttttgcgcacg
gtcccaccctactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aaccacgtcatcctgatagtcagcgacgaccacgagggtcgtgctgcacagaagaagctg
gagaccctcctggaggagaaagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccct
gggaccaaaaatgtgacagcgctgctgctggaggcgaaggagctggaggccagggtcatc
atcctctctgccagcgaggatgacgcggccacggtgtacagatcagcagccatgctcaac
atgacgggctcgggctacgtgtggctggtgggggagcgggagatctcgggcaatgccctg
cgctacgccccggacggagtgatcggcttgcagctcatcaacggcaagaacgagtcagcc
cacatcagtgacgctgtcgccgtggtggcccaggccgtgcacgacttgttcgagaaggag
aatatcacagacccaccgcggggctgcgtgggcaacaccaacatctggaagacaggaccc
ctttttaagagggtgttgatgtcctccaagtactcagagggtgtcaccggccgggtggag
ttcaatgaggatggggacaggaaatttgccaactacagcatcatgaacctgcagaaccgg
aagctggtccaggttgggatttacaacggcagcaatgtcctgaccaacgacaggaagatc
atctggccaggtggggaaactgagaaacctcaaggctatcaaatgtcaaccaagctgaag
attgtgaccatccaccaagagccctttgtgtatgtgaagcccactcaggcagatgggaca
tgtagggaggaattcaccatcaatggagatcctgtcaaaaaggttttctgcactggaccc
aatgagaccatcccaggccgtcccaccgtggccctgtgctgctacggcttctgcattgac
ctgctcatccgcctggcaggcgtgatgaacttcacctacgaggttcacctggtggctgat
ggtaaatttggtacccaagagagggtgaacaacagcaacaagaaggagtggaacgggatg
atgggggagctgctgagcggccaggctgacatgattgtggctcccctcaccatcaacaac
gagcgggctcagtacattgagttctccaagcccttcaagtaccagggcctcaccatcctc
gtgaagaaggaaatcccccgcagcaccctggactcgttcatgcagcccttccagagcacg
ctctggctgctggtggggctgtctgtgcacgtggtggcagtgatgttgtacctcttagac
cgattcagcccctttggccggttcaaagtaaacagtgaggaggaggaggaagatgccctg
actctctcctcagccatgtggttctcctggggagtcctgctgaactctggcattggagaa
ggtgctccccggagtttctctgcccgtatccttggcatggtgtgggctggctttgctatg
atcattgtggcttcatacactgccaacctggcagccttcctggtgttggaccgacctgag
gagaggatcacaggcattaacgacccccggctgcgcaacccctcggataagttcatctac
gccacggtgaagcagagctctgtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcacatggagaagcacaactacgagagcgctgccgaggccatccaggcagtg
agggacaacaagctccacgccttcatctgggactcggcggtgctggagttcgaggcctcc
cagaagtgtgacctggtgaccacgggggagctcttcttccgctccggcttcgggatcggc
atgcgcaaggacagcccctggaagcagaacgtctccctggccatcctcaagtctcacgag
aatggcttcatggaggatttggacaagacttgggtgaggtatcaagagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagagatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggcaaggtcacactcattggcaccaaagcaattggggaggactcgttgccagcgccc
ggcgccgagcgcggccgggccccccggcccgcggcccccgcaccatggcggctggtgctc
ccagcctgcgccaaccagccctgcagaatggtccctcaggagtgccagagagacaggctg
gcaccatggagccaagacagccctgggaagcttccaccccactctgaacgtcctagcgcc
caccatcacccgagctgcacagcctctccgcggcacatcatccccaccgccccaggagga
gatgcatgtgttccccataggcagctcctgcaactcgagtag
DBGET
integrated database retrieval system
