Agelaius tricolor (tricolored blackbird): 139603358
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Entry
139603358 CDS
T10815
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139603358 (RABGAP1)
Membrane trafficking [BR:
atrc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139603358 (RABGAP1)
Protein recycling
Other Rab GTPase associated proteins
139603358 (RABGAP1)
Endosome - Golgi transport
Rab associated proteins
139603358 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
139603358
NCBI-ProteinID:
XP_071310236
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QRELEDVLMDPPMEDQGSDRDHGEVRTDGDGEEPVVLEASASSTINPVSVAGLQKPEMSL
PVKPSQGDCEDLSPFTPVTDEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQIS
LDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAE
LFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATATPQTPDSDIFTFSVSLEIKED
DGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSRGKDVRSGD
MHLLDLESMGKSSDGKSYVITGSWNQKSPHFQFVNEETPKDKVLFMTTAVDLVITEVQEP
VRFILETKVRVCSPNERLFWPFSKRSSTENFFLKLKQIKQKDRKNNSDTLYEVVCLESES
ERERRKTTASPSLRLPQSGSQGSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETW
GELLSKWHLNLSVRPKTLSALVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKESP
QDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLH
MPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAH
MYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTTKDDLLLTDFEGALK
FFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERE
NRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEE
KRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKAEIEK
IRQKVDDCEHCREFFNKEGRVKVASTAKDGSDEDTDEEKETLKNQLREMELELAQTKLQL
VEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKETC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcttcagactcggtatccactctt
aacagtgaagattttgtcttggtttccaggcaaggggatgaaacaccatctacaaataat
ggtagtgatgatgaaaaaacaggactgaagattgtggggaatggaagtgagcagcagctg
cagcgggagctggaagacgtgctgatggatccacccatggaggatcagggcagtgaccgg
gaccatggggaagtcagaactgatggagatggggaagaacctgttgtccttgaagcgtca
gcatcctctaccattaacccagtgtcggtagcaggactccagaaaccagaaatgagcctg
ccagtgaaaccatcccaaggagactgtgaggatttgagccccttcactccagtgacagac
gaggacagcgtggtgttcagcaagctgacctacctgggctgcgcctcggtgaacgcgccg
cgcagcgaggtggaggcgctgcgcatgatgtccatcctgcggggccagtgccagatctcc
ctggatgtcaccctgtccgtgcccaacgtctccgaggggaccgtgagacttttagatcct
cagacaaacacagaaatagcaaattatccaatctataaaatccttttctgtgtacgaggg
cacgatgggacccctgaaagtgattgctttgctttcactgaaagccactacaatgcagaa
ctcttcaggattcatgtcttccgatgtgaaatccaagaggctgtgagccgaatcctgtac
agctttgccactgccttccggcgctctgccaaacagaccccgctctcagccactgccacc
ccccagactcctgacagcgacatcttcaccttctccgtgtccctggaaatcaaagaagat
gatgggaaaggttatttcagtgcagttcccaaagacaaggacaggcaatgcttcaaactc
cgccaagggattgataagaagattgtgatttatgtgcaacagacaacgaataaagaacta
gctattgaaagatgttttggccttctccttagccgtgggaaagacgttcggagtggcgac
atgcaccttttggatttggagtccatgggtaaaagttctgatgggaaatcatacgtgatc
actgggagctggaatcaaaagtctccacacttccagtttgtaaatgaagaaacaccaaaa
gataaagtgttgttcatgaccactgctgtggatttggtcataactgaggtgcaggagccc
gttcgattcattctggagacaaaagtcagagtttgctcacctaatgagaggctgttctgg
cccttcagcaaacggagctcaactgaaaatttcttcttaaaattgaaacagataaagcag
aaggacaggaagaacaactcggacactctgtatgaggttgtgtgcctggaaagtgaatct
gagagggagagaaggaaaaccacagccagcccctccctgcgcctgccccagtcgggctcg
cagggctccatgatcccatcgcctccagaggatgatgaagaggaggacaatgatgaacca
ctcttaagtggttctggagatgtttccaaagagtgtgcagaaaaaattcttgaaacgtgg
ggagagctgctgtccaagtggcacctgaacctgagcgtgcggcccaagacgctgtcggcg
ctggtgcggagcggcgtccccgaggcgctgcggggcgaggtgtggcagctgctggcaggg
tgtcacaacaacgaccacctggtggagaagtacaggatcctcatcacaaaggagtctcca
caagacagtgccatcacccgagacatcaatcgaacgttccctgctcatgactattttaaa
gacactgggggagatggccaggactccctgtacaaaatatgcaaggcctactctgtgtat
gacgaggagattggctactgccaaggccagtccttcctggctgctgtgctgctgttgcat
atgcctgaggagcaagctttcagtgttctggtcaaaatcatgtttgattatggactcagg
gaacttttcaaacagaactttgaagatttgcactgcaagttctatcagctggagcgcctc
atgcaggaatacattcctgacctgtataaccactttctggacatcagccttgaagcacac
atgtatgcttcccagtggttcctgaccctgttcactgcaaaattccctctctacatggtc
ttccatattattgacttactcctatgtgagggaataagtgttatcttcaacgttgcactg
ggactgttaaaaactaccaaggatgatttgctgctgactgactttgagggggctctgaag
ttcttccgagtgcagctgcccaagcggtaccgctccgaggagaacgccaagaagctgatg
gagctggcctgcaacatgaagattagccagaagaaactgaagaaatatgaaaaggaatat
cataccatgagagagcagcaggctcaacaggaggatcctatagaaagatttgagcgcgag
aaccggcgcctgcaggaggccaacatgagactggagcaggagaacgacgacctggcccac
gagctggtcaccagcaagattgcactgaggaaggacttggacaatgcagaggagaaggca
gatgccctcaataaggagctgctaatgaccaaacagaagctgattgatgcagaagaagaa
aagaggcgcctggaggaagaatctgcccagctgaaggaaatgtgtcgtagggaactagat
aaggcagagtcagagatcaaaaagaacagctctattattggtgactacaaacagatttgt
tcccagctgagtgagcgactggaaaagcaacaaacagcaaataaagctgaaattgagaaa
atacggcaaaaggtggatgactgcgagcactgccgcgagttcttcaataaggaaggccgt
gtgaaggtggccagcactgccaaggatggttcagacgaggacacggatgaggagaaggaa
acactgaagaaccagctgagggagatggagcttgagctggcccagaccaagctgcagctt
gtggaggcggaatgtaaaatacaggatttggagcaccatttgggtctggccctgaatgaa
gtacaagctgcaaagaaaacgtggttcaacagaacaataagctctataaaaacagtgact
ggagtccaaggaaaagagacttgttga
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integrated database retrieval system
