Agelaius tricolor (tricolored blackbird): 139603827
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Entry
139603827 CDS
T10815
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139603827 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139603827 (RAB11FIP1)
Membrane trafficking [BR:
atrc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139603827 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
PD40
Motif
Other DBs
NCBI-GeneID:
139603827
NCBI-ProteinID:
XP_071310893
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MAAPGWAPTHVRVTVLRARGLRAKAAAGGSDAYAVMALGRDKFRTSVAERCRGEPLWREE
ATFELPARPAALRLTVLHRALTGADKFLGRAEVELGPLREDGGRQHTRWYKLHSKPGKKE
KERGEIEVDIQFMRSNMTASMFDLSMKDKPRSPFGKLKDKLKGKRSSGLSDTASAIVPST
SHSPADSEDEAVEKEKKKSKFKALFSKPGLHKTSLSQSMSVLPTQQPLTQRVRLRPSDFQ
AQWDEEESQTSPASERSFESVPEQKPAPSPLFKSRKPAFLDSRQLTQGATNHTKKDGLSL
FSGLKSKNDPVSKSSLCINGSHVYMEETTTKDKTPTSSPSPHNLRRKKLFASEENLSSRS
TKPPEETGRTSPGQAFSGSTSLETFKSMTLPSYKLLSSEEHLETSVPPSIEPVRETKKPD
HKKSALLSLVTGKKETVKPSDAEIIPDRTLQSEENTIPEEKSEEEAKSPEGPADLGRGSP
SGDAHHAEEAITTKQLLSPCEEEQKPEKPAPAKTKAVKPRLGLSPEEEPKATLPTLAPDP
LPAFLSVHRISSANNPFISELGQTVQVPDSENITGSPASLTSPAFTAEHWNDKNPFTAEW
DRASRALDPDSIAHFPSSHHPAASVPKVPLPGQVSARGNNPFAADWGQGPEGSEASQGFS
GPRTPSVPSVCPFNDSNPFLSKHGAQAVPGSRAGSSPSCLPAGRDCSSAGHPARGASGGS
ADVALTSDVTAVPDPLGTLSDPPGLAPELHWDSAQLQPEGSLESSKPGPGKSVSFVLGEW
QGVPSGDVGLGGQEGGEQPLDSSGRLQMSSGAVGERAGFGGDPLTEPSGDSTHPTWSSDG
TAVEVSGGSTEPCTRGDKGFVSVSKCSDSLVPEAEQAQSPKSQLREEQEPCGGKQGAEHV
PTLEPQAPPPAGNEPLPQVQPTLRVCTVSPGEGDAGRAGREVPVPPKPAPRVAVLLRKPP
GAPQADAPAPGDAANSTPGLPFPEASAARGCLPQGGSLGTVTPAVAPRGKSRPVEKEGGD
GLSVCLTNVRSALPVPGDRSSVLPVIPEGGSDEELLGDCQDSCGATAGDRGVVGSGEQPQ
GVTPLHGEQRELSDSSAAAPVSPAALGGGAGAVPGACEPGSLAVLPAAVGAPRVCVQGAD
SGLAVPSHSRECDSHSEKQELERSAGTEECAERDFSEPSAFSSSLSSPCQPHSSSHSLLS
DTPGRRAESPKKPRAEGFADKAGNSGKKKLLQARVSPSETSPNHTPWCETVSPQHRLHPV
KPMNAMANKPQSKNLNVISTMNEKLLEMSVKKYDPSDPAYAYAQLTHDELIQLVLKQKDT
ITRKDLQVRELEDYIDNLLVRVMEETPNILRVSMSGNKKAGKM
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgggctgggcgcccacccacgtgcgggtgacggtgctgcgggcgcggggg
ctgcgcgccaaggcggcggcgggcggcagcgacgcgtacgcggtgatggcgctgggccgc
gacaagttccgcacgtcggtggccgagcggtgccggggggagccgctgtggcgggaggag
gccacgttcgagctgcccgctcggcccgccgcgctgcgcctcaccgtgctgcaccgcgcc
ctcaccggcgccgacaagttcctgggccgcgctgaggtggagctgggcccgctgagggag
gacggcggccggcagcacaccaggtggtacaagcttcactccaaaccagggaagaaggaa
aaggagagaggggagatcgaggtggatatccagttcatgaggagcaacatgacagccagc
atgtttgacctgtccatgaaggacaagcctcgctctccttttgggaagctcaaagacaag
ctcaagggcaagaggagcagcggcctctcggacacggcgtcggcgatcgtccccagcacc
tcccactcccctgctgacagcgaggatgaggcagtggagaaggagaagaagaaatccaag
ttcaaagcgctgttctccaagcctggcctgcacaagacatccctgtcccagtccatgtca
gtgctgcccactcagcagcccctcacccagagggttcggctgcggcccagcgacttccag
gcacagtgggatgaggaggagtcccagacatctcctgcctcagaacgatcctttgaaagt
gtgccagaacagaagccagctccttctcctctgtttaaatctcgtaaaccagcctttttg
gacagtaggcagctaacccagggagccactaaccacaccaaaaaggatgggctctctttg
ttcagtggccttaaatccaaaaacgatcccgtgtccaagtccagtctgtgcatcaatggc
agtcacgtttatatggaagagaccacgacgaaggacaagactccaacctcctccccctct
cctcacaacctcaggaggaagaagctttttgcttcagaggagaacctgtcctccaggtcc
actaaaccacctgaagagacggggagaacctctcctgggcaggcattctctgggtccacg
tccttagagaccttcaaatccatgactttgccatcatacaaactgctcagcagtgaggag
cacctggaaaccagcgttccaccaagcattgagcctgttagagagaccaaaaaaccagac
cacaaaaagtctgccttgctctccctggtcactgggaagaaggaaacggtgaagcccagc
gatgctgagatcattcccgacaggaccctgcagagcgaggaaaatacaattccagaagag
aagagtgaagaggaggccaaaagccctgaaggcccagcagatctgggcagagggagcccc
tcaggagatgctcaccatgcagaggaggccatcacaaccaagcagctgctcagtccttgt
gaggaggaacagaaacctgagaaacctgcaccagccaagaccaaagctgtgaagcccaga
ctgggcctgtctccagaggaggaacccaaagccacgcttcctactcttgcacctgacccc
ctccctgcttttctctctgtgcaccgtatcagcagtgccaataatccttttatttctgag
ctggggcagacagtccaagtgccagactctgaaaacatcactggttctcctgcctctctc
acttctcctgcttttactgcagagcactggaatgacaagaatccttttactgctgagtgg
gacagggcatccagagccttggatcctgacagcattgcccatttcccttcatcccatcat
cctgcagcctctgttcccaaagtgcctcttcctgggcaggtctctgccaggggcaataat
ccttttgctgctgactgggggcagggtcctgagggctctgaggcttcccagggtttctct
ggcccacgcacaccttctgtcccctctgtctgtcctttcaatgacagcaatcccttcctg
tccaagcatggggcacaggcagtgccaggttcccgggctggctcttccccttcctgcctt
cctgctgggagggattgttcctctgcaggacaccctgctcgtggtgcttcagggggctct
gcagatgtggctttaaccagtgatgtcacagctgtgccagaccctctgggcaccttgtct
gaccctcctgggctggctccagagctgcactgggattctgcccagcttcagcctgagggt
tctttggaaagcagcaagccaggccctgggaaatctgtgtcctttgtccttggggaatgg
cagggtgttccatcaggtgatgtgggtttgggtgggcaggagggtggagagcagccccta
gattccagtgggaggttacagatgagttcaggggcagtaggagagcgagcagggtttggg
ggtgacccattgacagagccctcaggggacagcacacatcccacctggagcagtgatgga
acagctgtggaggtcagtggtgggagcactgagccctgcacaaggggtgacaaaggtttt
gtgtctgtctccaagtgcagtgacagcctcgtgccagaggctgagcaggcacaatccccc
aagagccagctcagggaggagcaggagccctgtggtggaaagcagggggcagaacatgtg
cccacgttagagccccaggcacctccacctgctgggaatgagccacttcctcaggtccag
cccacactgagagtctgcacggtgtcccctggggaaggggatgcagggagggctggcagg
gaggtccctgtgcccccaaagccagccccacgagtggctgtgctgctgaggaaaccccca
ggggctccccaggctgatgctcctgctccaggggacgctgcaaattccaccccagggctc
ccattccctgaggcctcagctgctcgtgggtgcctccctcaagggggctccttggggact
gtcacccctgcagtggcacccagaggtaagagcaggcctgtagaaaaggagggtggggat
ggtttgtccgtctgtctgacaaatgtcaggtctgcccttcctgttcccggggaccggagc
tcggtgctgcccgtgatcccggagggaggctctgatgaggagctgctgggggactgccag
gacagctgtggggccactgcaggtgacagaggtgttgtagggagtggagagcagccccaa
ggtgtgacacctttgcatggagagcagagagagctctctgatagctctgctgcagcccca
gtgagcccggctgctctgggaggaggagcaggagccgtgcctggtgcttgtgagccaggg
agtttggctgtgctgcctgctgcagtgggggctcccagggtctgtgtccagggagctgac
tcaggcttagctgtgccatctcattccagggagtgtgacagtcactctgagaaacaggag
ctggaaaggagtgcaggtactgaggagtgtgcagagcgtgacttctctgagccttctgct
ttctcttcctccctgtcgagtccttgccagccccactcttcctctcattcccttctctct
gacaccccgggtcgtagagcagagtctccgaaaaagccaagagccgagggcttcgcagat
aaagcgggaaattcgggcaagaagaaacttctccaggcacgggtttcaccctctgaaacg
tcccctaaccacaccccatggtgtgaaaccgtgtctccccagcacagactccatcctgtg
aagccaatgaatgccatggcaaacaaacctcagagtaagaacctgaatgtcatcagcacc
atgaatgaaaagctgctggaaatgagtgtgaagaaatacgatccctcagaccctgcctat
gcctatgctcagctgacacacgatgagctgatccagctggtgctgaaacagaaggatacc
attaccaggaaggacctccaggtgcgggagctcgaggattacatcgacaacctgctggtc
agagtcatggaagaaaccccaaacatcctcagagtctccatgtctggcaacaaaaaagct
gggaagatgtga
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