Agelaius tricolor (tricolored blackbird): 139604209
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Entry
139604209 CDS
T10815
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139604209 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139604209 (CSTF3)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
139604209 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
139604209
NCBI-ProteinID:
XP_071311396
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSGEGTAGDQTAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEIAVEGNGPVENNTILNKAVKRSHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagagggaaccgccggcgaccagactgctgaatatgtcccagaaaaagtgaag
aaagctgaaaagaaactagaagaaaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcagcctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaggtggaaaagttatttcagcgctgccttatgaaggttttacacattgat
ttatggaaatgttacctttcctatgtacgagaaaccaaggggaagctacctagttacaaa
gaaaaaatggctcaggcctatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaagcagtaggatcttat
gcagaaaaccagaggatcacagctgtccgtagggtttaccagcgtggttgtgtcaacccc
atgataaacatagagcagctctggagagattataacaaatatgaagagggcatcaatatt
cacttagccaagaagatgattgaggacaggagtagagattacatgaatgcacgacgtgtg
gcaaaggaatatgagacagtgatgaagggcctggaccgcaacgctccctccgtgcccccc
caaaacaccccccaggaggctcagcaggtggacatgtggaagaagtacatccagtgggaa
aagagcaaccctctacgaacagaagatcaaactctgataacaaaaagagtgatgtttgcc
tatgagcagtgtctcctggtgctgggccatcacccagacatctggtatgaagcagctcag
taccttgagcagtccagcaagctgctggctgagaaaggggacatgaacaatgctaaactt
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttattaaagaagaat
atgcttctttattttgcatatgcagattatgaagagagccggatgaagtacgagaaagtg
cacagcatctacaaccggctcctggccatcgaggacatcgaccccacgctggtttatatc
cagtacatgaaatttgcaaggcgagcagaaggcattaaatccggaaggacgatatttaag
aaagcgagagaggatgcccggacccgccaccatgtctatgttactgcagctttaatggag
tattattgtagtaaggataagtctgtggcctttaagatttttgagctagggctgaaaaaa
tatggggacattccagaatatgtactggcatatatcgactacctttcccaccttaatgag
gacaacaatacaagagttttgtttgaacgtgttttaacttcagggagccttccacctgag
aaatctggggagatctgggctcggtttttagcctttgaaagtaacattggggatctggcc
agcatcctgaaggtggaaaaacggaggtttacagccttcaaggaagaatatgaaggcaaa
gaaacagctctgctggtggacaggtacaagttcatggatctgtacccttgctctgccagc
gagctgaaggcccttggttataaggatgtctcccgtgccaagctagcagcaataattcca
gaccctgtggttgcaccttccatcgtgcctgtcctcaaggatgaagtagacaggaaacct
gaatatcccaaaccagacacccagcagatgattccatttcagccaagacacttagcacct
ccaggtttacatcctgtcccaggcggggtatttcctgttccaccagcagctgtagttctc
atgaagctcctgccacctcctatttgttttcagggtccctttgttcaagtggatgagctc
atggagatattcagaagatgcaaactgccagacactgttgacgaagccgtacggataatc
acgggcggcctgcctgagatagctgtggaaggcaatggacctgtggaaaacaacaccatt
ctcaacaaggctgtgaagagatcacatgaggattctgatgatgatgaggagaaaggatct
gtagttccccctgtacatgacatttacagagcacgacagcaaaagagaatccggtga
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integrated database retrieval system
