Agelaius tricolor (tricolored blackbird): 139604291
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Entry
139604291 CDS
T10815
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04060
Cytokine-cytokine receptor interaction
atrc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139604291 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139604291 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
atrc04052
]
139604291 (GDF5)
Cytokines and neuropeptides [BR:
atrc04052
]
Cytokines
Transforming growth factors (RSTK binding)
139604291 (GDF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
RBD_ZCCHC3_2nd
Motif
Other DBs
NCBI-GeneID:
139604291
NCBI-ProteinID:
XP_071311507
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MKILHFLTLLLWHLTWLSLDLVPGALSNSEAGQGNPGSKLGFLKAEGKERNPSARTGTLR
TASHGYSAGTSKARTKSSAVQAGALLAKNDDSKKVPSRTAATEGKVGHLPSRPSGVRTVT
PKVQNLSSKVALKKTGTSSTDSDSFKTKKTKEPVTQREAKETFRHPPITPHEYMLSLYRT
LSDAERKGVNGSVKLEAGLANTITSFIDKGQDERAPTIRKQKYIFDISALEKDGLLGAEL
RILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQASTLLDSRTVSITDTPKWEVFDIWKLFR
NFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKAR
SGQDDKTVYEYLFNQRRKRRAPLATRQGKRPTKNLKARCSRKALHVNFKDMGWDDWIIAP
LEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDS
ANNVVYKQYEDMVVESCGCR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgcattttctcactttactgctttggcatttgacttggctgtctctggat
ctagttcctggagcgctgagtaattccgaagcaggccagggtaatccaggatctaaacta
ggttttttgaaagcagaaggaaaggagaggaatccctctgcacggacaggtacattgagg
actgcaagccatggatacagtgctgggacctcaaaggccaggactaaaagcagtgctgtt
caggctggagctctgctggccaagaacgatgactcaaagaaggttccctcaagaacagca
gccacggagggcaaggtaggacatctccccagcagaccttctggagtaaggacagtgact
ccaaaggttcaaaatcttagcagcaaggtggctttgaaaaaaactggcacaagcagtact
gacagtgattctttcaaaaccaaaaagactaaagagcctgtaacccagagggaagctaag
gaaactttccgacatcccccgataacgccacatgaatacatgctctctttgtacaggact
ctctcagatgcagaaagaaagggtgttaatggaagtgtaaaactggaggctggacttgcc
aatacaataaccagctttatagacaaaggacaagatgagcgagcaccaactataagaaaa
caaaaatatatttttgacatcagtgcattagaaaaagatggtttgctgggagcagagctt
cgaatattgagaaaaaaaccttctgatacctggaagtctcattcttctggaaaaacttcc
caagtaaaattatttagttgctctacaaacagacaggcctcaacactcttggactctcgg
actgtcagcatcaccgatacacccaagtgggaagtgtttgacatctggaaacttttcaga
aactttaaaaacttggttaacttgtgttttgaactggaaacttttgacagggggagagct
gttgatctcaggagtgtgggatttaatagaacaggaagacaggtcaatgaaaaggctctg
ttcttggtgtttgggaggacaaaaaaaagagacttattcttcaatgaaatcaaagctaga
tccggccaagatgacaaaactgtttatgagtacttattcaaccagaggcggaagagaaga
gctcctctagcaacacggcaaggcaagaggcccaccaagaatctgaaggcgaggtgtagc
agaaaagccctccatgtgaattttaaggatatgggctgggatgactggataatagcccct
ctggagtatgaggcgtatcactgcgaagggctctgtgaattccccctccggtcccacctg
gagcccaccaaccatgcagttatccagactttaatgaactccatggaccccgagtccacg
cccccgacttgctgcgtcccaacccggctgagccccatcagcatccttttcattgactct
gcaaacaacgtggtctacaagcagtacgaggacatggtggtggagtcctgtggctgtagg
tag
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