Agelaius tricolor (tricolored blackbird): 139604337
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Entry
139604337 CDS
T10815
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139604337 (CHD6)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139604337 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
139604337
NCBI-ProteinID:
XP_071311611
LinkDB
All DBs
Position
Unknown
AA seq
2734 aa
AA seq
DB search
MIMKIQKKEKQPPSLKALSLSPMSSAWECRTQDTFASSEEQDEVPHQVTVTATNTSGQCQ
CPKEEPNGAAQKRTSNQNGMQDSGGTGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKE
PKEPKKVKESKKPKEPKQREAAKKPRKPREPKAPKEPKDKKSGSEPAPRSRSKKSSKDTP
VEKKKKGKRKHEIPVNSLDLDQDLQSPSVQSPEESVESADSQKRRSGRQVKRRKYNEDLD
FKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGL
AFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFN
PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQI
PPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD
EMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISR
QMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNR
NCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEE
QVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA
NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPEAPDFQLQAMIQAAGKLV
LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFC
KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYR
LITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMD
EEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKW
AKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFN
EKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYK
GDEKIKSFIWDLITPTKDGQNQALQNHPTGLSAPVPRGRKGKKTKNQMLLPEIKNADWLA
TCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLP
DIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQG
VSDGAQDAAERSSVEKEESSGEKLEGLSKQEDIVTAGVGEASEKRDEPAAAQDGSDSDRS
CWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHGYWLQDEMFRRASEMDSVNKE
MQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAM
CKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLC
QPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLPG
PETLCCLYQSNSKLYSSPIYSQMDQSCEALENEAESHIKLETIDSTMSQAGGSPLDTNCE
TFMSEVRDIISSNYDESSLPDSLVCMMYDEKACPSEQSSLARDSPSCTDVGNSGTKLSEG
KLEGDEDPSSCDADAMREAPFLEGLQVGSDRMDNQNEEAEPSPSTPESNPPESASAKLSK
GLEQNGALASPAAGLPEHGTVERVLNVGLYSPSLHSYELKVPPEQRFISLLQEKGLEAKS
GPSQSHSEEDEEEEEDDDNSEAAADAVEGLNGPRTRADFDPEAHELGCEEQSSGLPTPED
TCPEDVNGERESLGLGEPVTEVREDCGLNEESTQQQHSLDQAQSQPFSLPTPLPQGRPQG
AEAPCVREEPLGQDAEGQTGCTETLHPEPQGIKQEECENRDDGEKASSNQSQDGPEKYLE
EENKNSASVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKG
KWPSSSQQFEAQSLLTAPAMASSTGSRSSFTESEAADSTFNNGVLMSRVQKEGFLSPAFA
KDEQKHRRPYEFEMERDAKQRSLEQLAAAHVHPPIVLNGWREAAVDLSRGSDGSPGSSSP
FPLNTNMPKLGTVNALQSSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRK
NVEGMDLIFLKERPLPNRLQDVQEEQPQPPQNSPLPDGPVAATSAPQPVPAVGSQEKAVP
NKSLLDWLRQQSDYTLDVPSFGTNFSDKPKQRRQRCKDPNKLDISSLTGEERVPVVHKGT
GRRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPENKFNRILTEPVLRDTGP
RRRGRRPRNELLKGPGVVADSSTGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFP
AGFAAVPSGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNSPMTTTCTATAPTSLTSTTK
GGTASAEKANEEKRGSQDGKKEPLTEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSP
GLIYPSMFLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGELANPEPETVSLPEKEA
ANSQNCVQQSPPAAAEKEQDGPAEEERQAAHDTD
NT seq
8205 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaaaaagaaaagcagccgccaagcttgaaagcactgagcctc
tccccaatgtcgtctgcctgggagtgcaggacgcaggacacctttgccagcagtgaagag
caggacgaggtgccacaccaggtgacagtgacagccacaaacacaagtggccagtgccag
tgcccgaaggaggagcccaatggggctgcccagaagcggacaagcaaccagaacgggatg
caggacagcgggggcacgggggtgaagaagaaacggaagaaaaaggatctgggagagcag
gaagggggagataaagcagctgtggaggtgaaaccaaagaggaggagagagcctaaagaa
ccaaaagagcctaaaaaggtgaaggagtctaagaaaccgaaggagcccaagcagagggag
gcggctaagaaaccccgtaaacctcgggaacccaaagccccgaaggagcctaaagacaag
aagagtggctctgagccagcccccagatcaagatccaagaagagcagcaaagacacccct
gtggagaagaagaagaaagggaagaggaaacatgagataccagtgaacagtttggatttg
gatcaggatctccagagcccatctgtacagagcccagaggagtctgtggagtcagctgac
agccagaaacggcgctcaggacggcaggtgaagaggaggaagtacaatgaggacctggat
ttcaaggttgtggatgatgatggcgagacaattgccgtgctgggagctgggcgaacctcg
gcactctccgcctctactctggcatggcaggcagaggagcctcccgaggatgatgccaat
atcattgagaagatccttgcctccaggatggtgcagaaagaggctcatcctggaggcctg
gcatttgagacagaggagttctacgtcaagtacaggaacttctcttacctccactgtaaa
tgggcaactctggaggagctggagaaggaccccaggatctcgcagaagataaagcgcttc
cggaacaagcaggctcagatgaaacatatttttacagagcctgatgaggatttgttcaac
cctgactacgtggaggtagatcgaattctggaggtggctcacacaaaggaccctgacact
ggggaggaggtgactcactacttggtgaagtggtgctcactgccctatgaggagagcacc
tgggagctggaggaggatgttgacccagggaaaattaaagagtttgaagccctccaaatc
cctccagaaatcaagcacatggtaacgtaccctgaggagcgcccagcgtccgagtcttgg
cagaagctggagaagtcccgggagtacaagaacagcaaccagctgcgggagtatcagcta
gaggggatgaactggctgctctttaactggtacaacaggaagaactgcatcctggctgat
gagatggggttggggaagacaatccagtcaatcactttcctctcagagatattcctgatg
ggcatccatggccccttcctcatcatcgcacctctctccaccatcacgaactgggagagg
gagttccgcacctggacggagatgaacgccatcgtgtaccacggcagccagatcagccgg
cagatgatccagcagtacgagatggtgtacagggacacacagggtaaccctctccctggg
atcttcaagttccaggtggttatcaccacctttgagatgatccttgctgattgcccagag
ctgaagaagatccagtggcgctgtgtggtcattgacgaggcgcatcgcctgaagaacaga
aactgcaaactcctggaggggctgaagctcatggccctggagcacaaggtgctgctaaca
gggacccccctgcagaactcagtagaggagctcttcagcctcctaaattttctggagcca
cagcagttcccctcagagacagccttcctggaagagtttggagacctgaagacagaggag
caggtgaagaagctgcagtccatcctcaagcccatgatgctgcgacggctgaaggatgat
gtagagaagaatctggcacccaagcaggagaccatcattgaggtggagctgaccaatatc
cagaagaaatactaccgggccatcctggagaagaatttctccttcctctccaagggtgcc
aaccagcacaatatgcccaacctcatcaataccatgatggagctgcgcaagtgctgcaat
cacccatacctcatcaatggggcagaggagaagatcctggaagacttccgcaaaacacac
tgcccagaggcaccagacttccagctgcaggcgatgatccaggcagctgggaagctggtg
ctcattgataagctgcttcccaagctgattgctggtgggcacaaggtgctcatcttctcg
cagatggtgcgctgccttgacatcctggaggactatctcatccagagacggtacacctat
gagcgcattgacgggcgagtgcgcggcaacctgcgccaggctgccatcgaccgcttctgc
aagcccgactcggatcgctttgtcttcctcctgtgcacgcgagcaggcgggctgggcatc
aacctgaccgctgctgacacctgcatcatcttcgactccgactggaacccacagaatgac
ctgcaggctcaagctcgctgccatcgcattgggcagagcaaggctgtgaaggtctatcgc
ctcatcaccaggaactcctatgagcgggagatgttcgacaaggccagcctgaagctgggc
ctggataaagctgtgctgcaggacatcaaccgcaagggcagcaccaatggggttcagcag
ctctccaagatggaggtggaggacctgctgcggaagggtgcctacggtgcactcatggat
gaggaggatgaggggtcaaagttctgtgaggaagacattgatcagatcctccagcgcagg
acacagaccatcacgatccagtctgagggaaagggctccacatttgcaaaggccagcttt
gtagcatcaggaaacagaactgacatttccttagatgaccccaacttctggcagaagtgg
gccaagatagcagagctcgatacagatgccaagaatgagaaggagagcctggtcatcgac
agaccccgggtgcggaagcaaaccaagcactacaactccttcgaggaggacgagctgatg
gagttctctgagctggacagtgactcggatgagcgacccacgcgctcacggcgcttcaac
gagaagacgcggcggtacctgcgggctgagtgcttccgtgtggagaagaacctgctcata
tttggctggggacgctggaaagatatcctgacccacgggcggttcaagtggcacctgaat
gagaaggacatggagatgatttgtcgggccttgctggtgtattgcgtcaaacactacaag
ggggatgagaagataaagagttttatctgggatctcatcacgccgacgaaggatggccag
aatcaggctctgcagaatcatcctacaggcctgtcagcaccggtgcccagaggcaggaag
gggaagaagacgaagaaccagatgctgcttcctgagataaagaacgcagactggctcgcc
acctgcaaccccgaggtggtgctccacgatgacagctacaagaagcacctcaaacagcat
tgcaacaaggttctgctgcgggtgcgaatgctctactacctgaaggctgaagtgctgggg
gaggctgcggataaagcctttgaggggacccctgccagggagctggatgtgctgctgcct
gacattgactacgtggagatcccagtggactggtggaatgccgaagctgataaatccctg
ctcattggcgtcttcaagcacggttacgagcggtacaacgccatgcgggcggacccagcg
ctgtgtttcctggagaaggtgggcatgcccgatgagaagctgctctctgccgagcagggc
gtcagcgatggggcacaggatgctgctgaaaggagcagtgtggaaaaagaagagagcagt
ggagaaaagctggaggggctgtcaaaacaggaggacatcgtgactgctggggtgggtgaa
gccagtgagaagcgggacgagccagcggcagcccaggatggctccgactcagacagatcc
tgctggcctgtctcctctgctctcacggccagactgcggcgactcgtcaccgtctaccag
cgctgcaaccgcaaggagctgcctccccgtgctgagatgctggtgcccggtaaccatggc
tactggctgcaggatgagatgttccggagagcctctgagatggactcggtgaacaaagaa
atgcagaaaaggtggaccaggagggagcaggcagatttctaccgcactgtctcttccttt
ggggttatctacgaccaagagaaaaaaatctttgactgggcccaattccgagccatctct
cgactggagaagaagacagatgagagcctggagaagtacttctacagctttgtggccatg
tgcaagaatgtctgtggtctccctttgtggaaagaggatggtcctccagaccctgacatc
tacgtggagcccatcacggaggagcgtgctgccaggaccctgtaccgcatcgagctgctg
cggaaggtgcgcgagcaggtgctcaagtgcccgcagctccacgagcgcctcaagctgtgc
cagcccagcctctacctgcccgtgtggtgggagtgtggcaaacacgaccgggacctgctc
atcggcactgccaagcacggcctgaaccgcactgactactacatcatgaatgacccccag
ctgtcctttctagatgcatacagaaactatgcccagcataaaagaacagggctcccaggc
ccagaaaccctgtgctgcctttaccagtctaactccaaactctacagttcccccatatat
agccagatggatcagtcctgtgaagccctggagaatgaagctgagagtcacatcaagcta
gaaaccatagacagcaccatgtcccaggctgggggcagcccgctggacacaaactgtgaa
acattcatgtctgaagtccgggacatcatttccagtaactacgacgagagctcgctgccg
gactcgctggtgtgcatgatgtacgatgagaaggcctgtcccagcgagcagagctccctc
gccagggacagccccagctgcacggatgtcggaaacagcggcaccaaactctctgagggc
aagctggagggggatgaggatccatccagctgcgatgcagatgctatgagagaggctccc
ttcctggagggtttgcaggtgggctctgaccgaatggacaatcagaatgaagaagctgag
ccttcaccttctacccccgagagcaatcctccagagagtgcctcagccaaactcagcaaa
ggcttggaacagaatggagcacttgccagcccggcagcagggctgcctgagcatggcacc
gtggaaagggtcctaaatgtggggctctacagtcccagtctccatagctatgaactaaag
gtccctcctgagcagaggttcatcagtctgctgcaggagaaaggattggaggcaaagtcg
gggccaagtcagagccacagtgaggaagatgaggaggaagaagaagacgatgataactct
gaggcagcagcagatgctgtggaaggcttgaatggtcccaggaccagggctgattttgac
cccgaagctcatgaactggggtgtgaggagcagagctctggtctccccacaccagaggac
acttgcccagaagatgtaaatggcgagagggagtccctgggtctgggggagcctgtgaca
gaggtcagggaggactgtggcttgaatgaggagagcacccagcagcagcactcactggac
caggctcaaagccagcctttcagcctgcccacacctctgcctcaggggaggcctcagggg
gcagaggctccctgtgtcagggaggagcccttgggccaagatgctgaggggcagacaggc
tgcacagagaccctgcaccctgagcctcagggcataaagcaagaagagtgtgagaacaga
gatgacggggagaaagccagcagcaaccagagccaagatggtccagagaagtacttggag
gaagagaacaagaattctgcttctgtcctgcccggggagattgatgatcttcaggatgcc
cgggcaccaaccattgcccagctgctgcaggagaagacgctttactccttctctgagtgg
cctaaggaccgtgtgatcatcaaccgcattgacaacatctgccacgccatcctgaagggc
aagtggccttcctccagccagcagtttgaggcacagagcctgctgacagccccagccatg
gccagcagcaccggcagcaggagcagctttactgagtcagaagccgccgattccaccttc
aataacggggtcttaatgtcacgagtacaaaaggaaggtttcctgagccctgcctttgca
aaagatgagcagaagcacaggagaccctatgaatttgagatggagagagatgccaaacag
aggagcctggagcagctggcagcagcccatgtccatccacccattgtgctgaacggctgg
cgcgaggcagcggtggacttgtccagaggctctgatgggtccccagggagctcctctcct
ttccccctgaacacaaacatgcccaaattggggaccgtgaatgccctccagagctccctg
ggcatggacttgtctggcatcctacaggcagggttaatccatcctgtcactggacagatt
gtaaatggcagcctccgaagagatgatgctgccatgaggaggagacggggcaggaggaaa
aatgttgaagggatggacctcatcttcttgaaggagaggcctcttccaaacaggctgcag
gacgttcaggaagagcagccacagcctcctcagaacagtcccctccctgatgggccagtt
gctgctacctcagctccacagccagtcccagctgtaggcagccaagagaaggctgtcccg
aataagagtctccttgactggctccggcagcagtctgactacacactcgatgtccccagc
tttggcacaaatttttcagacaagcccaagcagaggaggcagcgctgcaaggaccccaac
aaactggacattagctctctgacgggagaggagcgggtgccggtggtacataagggtacc
ggacggcggttagggggagccacggcaccagcattgaaggaattgccaaggtggcttgat
gcaaacttggagtatgctgttgcagctgactgggctgacattgttaagctttcaggctac
ttacccgaaaacaaattcaatcgcattctcaccgagcctgtgctccgggacactgggcca
cgccggagagggaggaggccccggaatgaactccttaaaggccctggtgttgtagcagat
tcttctactggaatgggaccactgttcatgaacggactaattgcagggatggatctagtg
ggacttcagaacatgagaaatatgcaagggatccctctgactgggctggttgggtttcct
gctggctttgcagcagtgccctctggtgaggatgtgaagagcaccctgagcatgttgccc
atgatgctcccgggcatggcgaccgtaccccagatgttcggtgtgggagggctcctcaac
tccccgatgaccacaacttgcaccgccactgctccgacttcgttaacaagcacaacgaaa
ggcggcactgccagcgccgagaaagccaatgaggagaaacggggcagccaggatgggaaa
aaggaacctctcactgaagataagcctggtcctagttcattttctaatcagacagaatcc
gcaataactaccagtagtcctgtagcttttaacccatttcttatcccagggatgtctcct
ggactgatctatccctccatgttcctttcccctggcatcggcatggcgctgcctggcatc
cagcaaaccaggcactcggaggcggcaaacctggagagccagaagcggaagaggaagaaa
gcgaaaggggaattggcaaatccagagccagaaactgtctcactgccggaaaaagaagct
gcaaacagtcaaaactgtgtgcagcagagcccgccagcggcagcagagaaggagcaggac
ggaccagcagaggaggagcgccaagcagctcacgataccgattag
DBGET
integrated database retrieval system
