Agelaius tricolor (tricolored blackbird): 139604672
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Entry
139604672 CDS
T10815
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04140
Autophagy - animal
atrc04148
Efferocytosis
atrc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139604672 (VPS16)
04148 Efferocytosis
139604672 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139604672 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139604672 (VPS16)
Membrane trafficking [BR:
atrc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139604672 (VPS16)
Hops complex
139604672 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
139604672
NCBI-ProteinID:
XP_071311973
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKTPS
ARPLLEIYSASGLLLASVPWKSGHLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIDDLKLRRLPEVPGLQKAPPCWT
VLAQDRVTMVLLAMGQELFLLDNTSCSVLTPPGLSPSAGPFLHVAVSFTHRLLALFCDSG
SVWMGTASLKEKFCEFNTGIRSPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNCSECIRF
VLDEDSYLVPELDGVRILSRSTHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQ
KADEYLREIREQQLLPEAVGQCIEAAGYEHEPETQKSLLRAASFGKCFLDKFPPEGFVRM
CQDLRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLAIRICEFLRLPEMQGV
SRILAHWACYKVQQKDKSDEEVAQAINQKLGDTAGISYSDIATRAYDCGRAELAIKLLEY
EPRSGEQVPLLLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGSFFMTLQNQPVAL
SLYRQFCRHQERETLKDLYNQDDNHQELGNLHVLGGYCQKRIEGRMAALQNALDEFYKAK
NDFAAKATEEQIKLLRLQRHLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFRIP
DKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE
QRVKAFVLVGDLEQAAEAAMERKNEAEMSLVLSRCSPGTDGALAERLNRARAQLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaggagaccttctatcggaagctg
gagctctactccatggaatgggggctgcgggaggatctccgtgactgtgtggtggcagct
gccccatatgggggtcccatagctctgttgaggaattcccggcgggacaagacccccagt
gcccgcccgctcctggagatctactcggcctcggggctgctcctggccagtgtcccgtgg
aagagcggccacctggtgcacctgggctggacggcgggggaggacctgctgtgcatccag
gaggatgggaccgtcctggtctacaacctgttctgcgagttcaaacggcacttcagcatg
ggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttccacacggagttcggg
acgggcgtggccatcctgacgggggcgctgcgcttctccctcgccaccaacatcgacgac
ctcaagctgcgccgcctgcccgaggtccctgggctgcagaaggccccgccgtgctggacc
gtgctggcccaggacagggtgaccatggtgctgctggccatgggacaggagctcttcctg
ctggacaacacctcctgctccgtgctgacgccgcccgggctgagcccctcggcggggccg
ttcctgcacgtggccgtgtccttcacccaccggctcctggcgctcttctgcgactccggc
tccgtctggatgggaacggcctcgctcaaggagaagttctgcgagttcaacaccggcatc
cgatccccgcccaagcaaatggtttggtgcacgcggccccgcagccggcagcgcgccgtg
gtgctggcctgggagcggcagctgatggtggtggggaactgctccgagtgcatccgcttt
gtcctggatgaggattcctacctggtgcccgagctggacggggtcaggatcctgtcccgc
agcacccacgagttcctgcacgagatcccagaggccagccaggagattttccgcatcgcc
tccatggccccgggcgctctgctgctggaggcacagaaggagtacgagaaggagagccag
aaggccgacgagtacctgcgggagatccgcgagcagcagctgctccccgaggccgtgggc
cagtgcatcgaggccgcgggctacgagcacgagcctgaaacccagaaatccctgctgagg
gcagcttcctttgggaagtgtttcctggataagttcccgcctgaggggttcgtgcgcatg
tgccaggacctgcgggtcctcaacgccatcagggactaccagattgggatcccgctcacc
ttcacccaatacaagcagctcaccatcgaggtgctgctggacaggctggtcctgcgccgc
ctgtaccccctggccatccgcatctgcgagttcctgcgcctgccggagatgcagggcgtc
agccgcatcctggcgcactgggcctgctacaaggtgcagcagaaggacaagtcggacgag
gaggtggcccaggccatcaaccagaagctcggggacactgcgggcatctcctactcggac
atcgccacgcgcgcctacgactgcggccgcgccgagctggccatcaagctgctggagtac
gagccccggagcggggagcaggtgccgctgctgctgaagatgaaacggagcaaactggcc
ctgggcaaagccatcgagagcggggacaccgacctggtgtacacggtggtgctgcacctc
aagaacgagctcaaccgcggctccttcttcatgaccctgcagaaccagcccgtggccctg
agcctgtaccgccagttctgccggcaccaggagcgggagacgctgaaggatttgtacaac
caggacgacaaccaccaggagctgggcaacctgcacgtgctggggggctactgccagaag
cggatcgagggccgcatggccgccctgcagaacgccctggacgagttctacaaggccaag
aacgactttgctgccaaggccacagaggagcagatcaagctgctgcggctgcagcggcac
cttcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtggccacc
ctcatcctggacgggcaccacaagcgcgccgagcagctctaccgggacttcaggatcccg
gacaagaggtactggtggctgaagatcaatgccctggccacccgcggggactgggaggag
atggagaagttctccaagagcaagaagtcgcccattgggtacctgccctttgtggaggtg
gcagtgaagcaccacaaccgctacgaggccaagaaatacgcgccgcgtgtgccgcccgag
cagcgcgtcaaggccttcgtcctcgtgggggacctggagcaggcggccgaggcggccatg
gagcgcaagaacgaggccgagatgagcctggtgctgtcccggtgctcccccggcaccgac
ggcgccctggctgagaggctcaaccgggcccgggcacagctcctcaaaaagtga
DBGET
integrated database retrieval system
