Agelaius tricolor (tricolored blackbird): 139604760
Help
Entry
139604760 CDS
T10815
Name
(RefSeq) keratin, type II cytoskeletal 5-like
KO
K07605
type II keratin, basic
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139604760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atrc04812
]
139604760
04147 Exosome [BR:
atrc04147
]
139604760
Cytoskeleton proteins [BR:
atrc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
139604760
Exosome [BR:
atrc04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139604760
Exosomal proteins of other body fluids (saliva and urine)
139604760
Exosomal proteins of colorectal cancer cells
139604760
Exosomal proteins of bladder cancer cells
139604760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
ATG16
LPP
HALZ
CCDC93_CC
CC149
COG6_N
Topoisom_I_N
APG6_N
DUF7603
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
139604760
NCBI-ProteinID:
XP_071312094
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MSRQSVCMSFGVGGRKGFSSCSAVGGGFGGGGGRSKISYSSYSSSRGGSGGGHCGGFSSR
SLHSMGGSRRIAMGGCYGGGGYGGRMGGFGGGMSCGGMGGGGMGGGGMGMGGFGGGMGGG
AGMGGFGGGMGSGGMGGMGGFGGPGFPGGIQPVQVDPSLLRPVHVEIDPQIQQVKNQEKE
QIKTLNNQFASFIDKVRFLEQQNKVLSTKWELLQQQGPSGPRKNLDVIFENYIQNLRRQL
ESILAQRGQLESELQNMRQYVEEFKTKYEEEINRRTAAENEFVVLKKDVDSAYMTKVELE
ARVGALTDEINFLRVIYEEELSQMQTISRDLSVVVSMDNNRHLDLDSIIEEVRRQYEQIA
QSSRAEAEAWYQSRYEELQNTAGKHGDSLRNTKMEIQELTRNVQRLRAEIENVKKQNQQL
QAAIAEAEERGEMAIKDARRKLEELECALNKDKEELARLLKEYQELLNTKIALDVEIAMY
RKLLEGEENRLCNDSMSNVNVSVVGRTTVSGGRGGMGGGFGGSGMGGGFGGGSCGMGGGF
GGGSGMGGGMGGGMGGGGICGGGSSFGGGSMGGSCGMGGGMYSGGFSSGSGRMCGSGGGS
SSVRRCVTTTSVKSSGVRF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcagtctgtctgcatgagctttggagtcgggggaagaaagggattcagctcc
tgctctgctgttggtggtggatttggaggcggtggtggccggagcaagatcagctacagc
tcgtactcctcatcccggggaggaagcggaggaggacactgtggggggttcagcagccgg
agcctccatagcatggggggcagcagaaggattgccatgggcggatgttatggtggtggt
ggatacggtggcaggatgggtggctttggtggaggaatgagctgtggagggatgggtggt
ggtggaatgggcggtggaggaatgggaatgggtggctttggtggtggaatgggtggtggg
gcaggaatgggtggctttggtggtggaatgggcagtgggggaatgggcggaatgggtggc
tttggtggtccaggcttccctggaggcatccagccggtgcaagttgaccccagcctcctg
cgtccggtccacgttgagatcgacccccagatccagcaagtcaaaaaccaggaaaaggag
cagatcaagaccctgaacaaccagtttgcctccttcatcgacaaggtccgattcctggag
cagcagaacaaggtgctctccaccaagtgggagctgctccagcagcaagggccgtcaggg
cccaggaagaacctggatgtgatctttgagaactacatccagaacctgcggaggcagctg
gaatcaatcctggcacagcggggccagctggaatcggagctgcagaacatgaggcagtac
gtggaggagttcaaaaccaagtatgaggaggagatcaaccgtcgcacggctgctgagaac
gagtttgtggtgctgaagaaggatgtggacagtgcctacatgaccaaagttgagctggaa
gccagggtgggagctctgacagacgaaatcaacttcctgagggtcatctacgaggaggag
ctgtcccagatgcagacgatcagccgggatctgtccgtggtggtgtccatggacaacaac
cggcacctggacctggacagcatcatcgaggaggtccggcgccagtacgagcagattgcc
cagagcagccgggctgaggccgaggcctggtaccagagccggtatgaagagctccagaac
actgctggaaaacacggggacagcctccgcaacaccaagatggagatccaggagttgacc
aggaatgtccagaggctgcgggctgagattgagaacgtgaagaagcagaaccagcagctt
caggcagccatcgctgaggctgaggagagaggggagatggccatcaaggatgccaggagg
aagctggaagagctggaatgtgccctgaacaaggacaaggaggagctggctcgcctgctg
aaggagtaccaggaactgctgaacaccaaaattgcactggatgttgagattgccatgtac
aggaagctgctggagggagaggagaacaggctgtgcaacgacagcatgtccaacgtcaat
gtctctgtggtaggcaggacgactgtctctggaggcagaggaggcatgggaggaggattc
ggaggcagcggcatgggaggaggattcggaggtggcagctgtggaatgggaggaggattc
ggaggcggcagcggcatgggaggaggaatgggaggaggaatgggaggaggcggcatctgc
ggaggaggcagcagctttggaggaggcagcatgggcggcagctgtgggatggggggagga
atgtactctggtggcttctcctctggaagcggaaggatgtgcggctctggtgggggatcc
tcctccgtgcggagatgcgtcaccaccacctcggtcaaatcttcgggagtgagattctga
DBGET
integrated database retrieval system
