Agelaius tricolor (tricolored blackbird): 139604809
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Entry
139604809 CDS
T10815
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc00260
Glycine, serine and threonine metabolism
atrc00630
Glyoxylate and dicarboxylate metabolism
atrc00670
One carbon pool by folate
atrc01100
Metabolic pathways
atrc01200
Carbon metabolism
atrc01230
Biosynthesis of amino acids
atrc01240
Biosynthesis of cofactors
atrc04981
Folate transport and metabolism
Module
atrc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
139604809 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
139604809 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
139604809 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
139604809 (SHMT2)
Enzymes [BR:
atrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
139604809 (SHMT2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
139604809
NCBI-ProteinID:
XP_071312184
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MWPLRLGTTLQRWGSRLGTGPLRAQHGAAAAAAPGHCPGWTGQESLAQSDPELWSLLQKE
KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRA
LEAFDLDPARWGVNVQPYSGSPANLAAYTALLQPHERLMGLDLPDGGHLTHGYMTDTKRI
SATSIFFESMPYKLDPATGLIDYAQLEVTARLFRPRLIIAGTSAYARLIDYARIRRVCDE
VKAYLLADMAHISGLVAAKVIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKRT
GKETLYDLEDRINFSVFPSLQGGPHNHAIAAVAVALKQASSPAFRQYCQQVLRNAKAMAQ
ALLQRGYTLVSGGTDNHLVLVDLRPKGMDGARAERVLELVSITANKNTCPGDRSALTPGG
LRLGAPALTSRQFREEDFQKVVEFIDEGIALALDVKSKTSKLQDFRNFLLQDPGTQQRLQ
ELRGRVETFARAFPMPGFSDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccggctgggcacgaccctgcagcgctggggctcccgcctgggcacgggc
cccctccgggcccagcacggcgccgctgccgccgctgcccccgggcactgcccgggctgg
acgggccaggagagcctggcccagagcgaccccgagctctggagcctcctgcagaaggag
aaggatcggcagtgccgggggctggagctgatcgcatccgagaatttctgcagccgggca
gcgctggaggccctgggctcctgcctgaacaataaatactcagaggggtatcctgggaag
aggtactatgggggtgcagaggtggtggatcagatcgagctgctgtgcgagcagagggct
ctggaggcgtttgacctggaccctgcccgctggggcgtcaacgtccagccctactcgggc
tccccggccaacctggccgcctacacggccctgctgcagccccacgagcgcctgatgggg
ctggacctgcccgacgggggccacctcacccacggttacatgacggacaccaagcggatc
tcggccacctccatcttcttcgagtccatgccctacaagctggatcccgccacaggcctc
attgactacgcccagctggaggtgaccgcgcgtctcttccgtccccgcctgatcatcgcg
ggcaccagcgcctacgcccgcctcatcgactacgcccgcatcaggagggtgtgtgacgag
gtcaaggcctacctgctggcagacatggcccacatcagcggcctggtggccgccaaggtg
atcccgtcccccttcgagcacgcggacgtcgtcaccagcaccacgcacaagaccctgagg
ggggccaggtcagggctgatcttctaccgcaagggcgtgcgctcggtggacaagaggacg
ggcaaggagacgctctacgacctggaggacaggatcaacttctccgtgttcccctcgctg
caggggggaccccacaaccacgccattgctgccgtggccgtggccctcaaacaggccagc
tccccggccttcaggcagtactgccagcaggtgctgaggaacgccaaggccatggcacag
gcgctgctgcagaggggctacaccctggtgtcagggggcaccgacaaccacctggtgctg
gtggacctgcggcccaagggcatggacggggcgcgggcagagcgggtgctggagctggtg
tccatcactgccaacaagaacacgtgcccaggggacaggagtgccctgacccccgggggg
ctgcgcctgggtgcccctgccctgacctcgcgccagttccgtgaggaggatttccagaag
gtcgtggagttcatcgacgagggcatcgccctggccttggacgtcaagagcaaaaccagt
aagctccaggatttcaggaatttcctgctccaggacccgggcacgcagcagcgcctgcag
gagctgcgggggcgcgtggagaccttcgcccgtgccttccccatgcccggcttcagcgac
cactga
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