KEGG   Agelaius tricolor (tricolored blackbird): 139604859
Entry
139604859         CDS       T10815                                 
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Brite
Transcription machinery [BR:atrc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     139604859
Chromosome and associated proteins [BR:atrc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     139604859
    SLIK complex
     139604859
SSDB
Other DBs
NCBI-GeneID: 139604859
NCBI-ProteinID: XP_071312274
LinkDB
Position
Unknown
AA seq 1751 aa
MNGHSDEDVRNSSGESSQSDDDSGSASASESGSSSGSSSDGSSSQSGSSDSESGSESDTS
REKKQVQAKLPPKLDGSEDSSNSEDSVDDSSSEARKKKHGDEDWQMSGSESVSGTSSDSE
SEEDKEKSSCEDSESDYEPENKVKSRKPPSRIEPKSGKKIAGQKKRQLDSSDNDDYDKRG
SRRQATVNVSYKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAA
TTIYAVEADGDPNTGFEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDN
YKKKEQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYC
KWQGLPYSECSWEDGALIAKKFQTCIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPS
YIGGHDSLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYG
PFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLT
TYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLK
ELWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVE
QILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDN
EFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPF
QRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND
LQAQARAHRIGQKKQVNIYRLVTKASVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTG
STPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTV
GDELLSQFKVANFSNMDEDDIELKPEQNLRNWEEIIPEVQRRRIEEEERQKELEEIYMLP
RMRNCAKQISFNGSEGKRSRRRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEI
RRFIKSYKKFGGPLERLDAIARDAELVDKSEIDLRRLGELVHNGCIKALKDNSFGQERAG
GRFGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPADPEERKRYVIPCHTKAAHFDI
DWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIK
LLNKDLARKEVQRLTGAGNSKRKKARSKKNRATKTAKIKEEIKSDSSPPSEKSDDDEYNE
DEIVSVKCPHKKIKAEENEEKPEPDIGIKMEAVEKRETREKENKRHLKREKKEDKKEFKN
IKEKRESKLKESTQKEKEVKEEKANELKSENKEKNKKVSLLDIPVHITATSETVPISEES
EELDQRTFGVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYA
NPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHSEQNISNNMNTHVIRN
PGVERLKENTNHDDSSRDSSSDRHLSQYYDHHKDKHQEDAYNKNDSRKRSYSAFSNGKDH
RDWDHYKQDSRYYSDGKRRKLDDHRSRDHRSNQEGSLKDSRPHSNHRSHSDHRIHSDHRS
TSEYIHHKSSRDYRYHSDWQIDHRASGSGPRSPLDQRSPYGSRSPIGHRSPFEHSSDHKS
TPEHTWSSRKT
NT seq 5256 nt   +upstreamnt  +downstreamnt
atgaatgggcacagtgacgaagatgtaagaaacagtagtggagagtcaagccagtcagat
gatgattctgggtcagcatcagcttctgaatctggttcaagctctggaagcagtagtgat
ggaagtagcagtcaatctggtagcagtgactctgagtctggttcagagtctgacacatct
agagagaagaaacaagttcaagctaaactcccaccaaaacttgatggatccgaggattca
tcgaacagtgaagattctgtagatgactcttccagtgaagccaggaagaaaaaacatgga
gatgaagactggcaaatgtctgggtcagagtcagtatcaggaactagttctgattctgaa
tcagaggaagataaagagaaaagcagttgtgaagacagtgaatctgactatgagccagaa
aacaaagtcaaaagccggaaacctccaagcagaattgagccaaaaagtggcaaaaagatt
gcaggacagaaaaagaggcagcttgattcgtcagacaatgatgactatgacaagagagga
tctcgtcgtcaggcaacagtcaatgttagctacaaagaagctgaagaaaccaagacagat
tctgatgacttgttggaagtttgtggagaagatgtcccacagcctgaagaagatgaattt
gaaactatagagaagtttatggatagtcgaattggccgaaaaggagccactggtgctgca
accaccatctatgcagttgaggcagatggtgacccaaatactgggtttgaaaaatcaaag
gagccaggagaaatacagtatcttattaaatggaaaggctggtcacacatccataataca
tgggaaactgaggaaacactgaagcaacaaaatgttaaaggaatgaagaaactggacaac
tacaaaaaaaaggaacaggaaacaaaacgctggctgaaaaatgcttctccagaagatgtg
gaatattataactgccagcaggaacttacagatgatctacataaacagtatcaaatagtg
gagaggataattgctcattcaaatcagaaatcagcagctggttatccagactactattgc
aaatggcaaggtctgccttactcagaatgtagctgggaagacggtgctctcattgccaaa
aaatttcagacatgtattgatgagtattttagcagaaaccaatccaagactactccattt
aaggactgcaagattctaaaacagaggccgaggtttgttgcactaaagaagcaaccatct
tatattggaggacatgacagtttagagttaagagattatcagttaaatggactgaactgg
cttgcccactcatggtgcaaagggaatagttgtattcttgcagatgaaatgggtctgggt
aaaacaatacaaacaatttcttttctgaactacctgtttcacgaacatcaactgtatggg
cctttcttgctagtcgtgccactttctaccttgacatcttggcaaagagagattcaaact
tgggctcctcagatgaatgctgtggtttacttaggagatataactagcagaaatatgata
agaactcatgaatggatgcatccacagaccaagcgattaaaatttaatatacttctaaca
acttatgaaattttgctgaaggataagtcattccttggtggtctgaattgggtatttata
ggagttgatgaagctcatcgtttaaaaaatgatgattcccttctgtacaagactttaata
gactttaagtctaatcatcgtcttcttattactggaacccctctgcaaaactcccttaaa
gagctttggtctttgctgcacttcatcatgccagaaaagttttcttcctgggaagatttt
gaagaggagcatggcaaagggagagagttcggttatgcaagtcttcacaaagaacttgaa
ccatttttactcagaagagttaaaaaagatgtagaaaagtctttgcctgctaaggttgaa
caaattttgaggatggaaatgagtgcattgcagaagcaatattacaagtggattttaacc
aggaattacaaagccctgagtaaaggttcaaaaggcagtacctcgggctttttgaacatt
atgatggaactcaagaagtgctgtaaccattgctacctcattaaaccaccagatgataat
gaattctataataaacaggaagccttacagcatttaatacgtagcagtggcaaactaatc
cttcttgacaagctactgattcgcctacgagaacgtggcaacagagtactgattttctct
cagatggtgaggatgctcgacatcctagcagagtatttgaagtatcgtcagtttcccttt
cagagacttgatggatcaataaaaggggaattgaggaaacaagccttggatcattttaat
gcagaaggctcagaggacttctgctttttgctgtctaccagagctggaggattaggtata
aacttagcatctgctgacactgtagttatatttgattctgattggaatccacagaatgat
ctgcaggcacaggctagagctcataggattggacagaagaaacaggttaatatttatcgg
ctagtcacaaaagcatcagtagaagaagacattcttgaaagagccaagaaaaagatggtg
ttagatcacttagtaattcagagaatggacactacagggaaaactgtactacatacaggc
tctactccctccagctcaacaccttttaataaggaagagttatcagcaattttgaagttc
ggtgctgaggaactttttaaagaacctgaaggggaagaagaggagcctcaggaaatggat
atagatgaaatcctgaagagggctgaaactcgagaaaatgaaccaggtccactgactgta
ggagatgagttgctttcacagttcaaggtggctaacttttctaatatggatgaagatgac
attgagttgaaaccagaacaaaatttaagaaactgggaagaaatcattccagaagtccag
cggcgacgaatagaagaggaagaaagacaaaaagaacttgaagaaatatatatgctgcca
aggatgagaaactgtgcaaaacagatcagctttaatggaagtgaagggaaacgcagtagg
aggagaagatattctggatctgatagtgactcagtctcagaaagaaaacgaccaaaaaaa
cgtggaagaccacgaactattcctcgagaaaatattaaaggatttagtgatgcagagatt
aggcggtttataaagagttacaagaaatttggtggcccacttgaaaggttagatgctata
gctagagatgctgagctagttgataaatctgagatagaccttagacgtctgggagaactt
gtacataatggatgcattaaggctttaaaggacaattcctttggccaagaaagagcagga
ggtagatttgggaaagttaaaggcccaacattccgaatatcaggagtgcaggtgaatgca
aagttagttatttctcatgaagaagagttggcaccattgcacaaatccattcctgcagat
ccagaagaaaggaaaagatatgtcatcccatgccacaccaaggcagctcattttgatata
gattggggtaaggaagatgattccaatctgttaataggtatctacgaatatggctatggc
agctgggaaatgataaaaatggatcctgatctcagtttgacacaaaagattttacctgat
gacccagataagaaaccacaggcaaagcagttgcagacccgtgcagattacctcattaaa
ttactgaataaagaccttgcaagaaaagaagtgcaaagacttactggtgcaggcaattca
aagaggaagaaagcaagaagtaagaagaatagagcaacaaagactgcaaaaattaaagaa
gaaataaaaagtgactcatcaccaccctcagaaaaatctgatgatgatgagtataatgag
gatgagattgtttcagtgaaatgtccacataaaaaaataaaagcagaagaaaatgaagaa
aagcctgagccagatattggtataaagatggaagctgtggaaaaaagagagacaagagaa
aaagaaaataagaggcatttaaaaagagagaaaaaagaggataagaaagagtttaaaaat
attaaagaaaagagagaaagcaaactaaaagaatccacacagaaagaaaaagaagtaaag
gaagaaaaggcaaatgaactcaaatctgaaaataaagaaaaaaataaaaaagtttcattg
ttggatattccagttcatattactgcaactagtgaaacagttccaatatcagaagaatct
gaagaactggatcagaggacatttggtgtgtgcaaagaaagaatgaggcctgttaaagca
gcattgaaacaattggatagaccagagaaaggcctttctgaaagggaacagctggagcat
actagacagtgcctaatcaaaattggggaccacattaccgaatgtctaaaagagtacgca
aatcctgaacaaattaaacagtggagaaaaaacttgtggatttttgtctctaagtttaca
gaatttgatgccagaaagctgcacaagctgtataaacatgcaatcaaaaaacgccaagaa
tctcagcagcacagcgaacagaatattagcaacaacatgaatacacatgtaattagaaat
ccaggtgttgaaagactgaaggagaatacaaaccatgatgacagtagcagggatagttct
tctgatagacatttgtcacagtactatgatcatcataaggacaagcatcaggaagatgct
tataataaaaatgactcaaggaaaaggtcctattcagccttcagcaatggaaaagaccac
agagactgggatcactataaacaagacagcagatactatagtgatggtaaacgtagaaag
ctggatgaccacaggagcagagatcacaggtcaaaccaggaaggaagtttaaaagacagt
cgacctcattcaaatcaccgttcccattcagaccacaggatacattcagatcaccgttcc
acttcagagtatatccatcataaatcttccagagattataggtaccactcagactggcaa
atagaccacagagcttctggtagtggcccaaggtcaccattagatcagaggtctccttat
gggtcaagatctcctataggacacagatctccatttgaacactcatcagatcacaaaagt
acacctgaacatacatggagtagccggaaaacataa

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