Agelaius tricolor (tricolored blackbird): 139605259
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Entry
139605259 CDS
T10815
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139605259 (BMAL1)
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139605259 (BMAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
139605259
NCBI-ProteinID:
XP_071312707
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD
KDDQHGRLEYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPANGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTTVLESGDAAFPQLAASPHSMDSVLQAGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS
SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGMDMIDTEQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcttctacaattagtgactttatgtcaccagaccct
gctgacttgatctccagttcccttagcacttcaggaatggactgtaataggaaaagaaag
ggaagctcaactgattatcaactcgatggctttccttttgaggaaggtatggatacagat
aaagatgaccaacatggaagattggagtatgcagaccaacaaggcaggataaaaaatgca
agggaggctcacagccagatcgagaagcggcgcagggataagatgaacagcttcatcgac
gagctggcctcgctggtgcccacgtgcaacgccatgtcccgcaagctggacaagctcacc
gtgctcaggatggctgtccagcacatgaaaacacttcgtggtgctacaaacccatataca
gaagcaaactacaagcctgcttttctatcagatgatgaactaaaacaccttattctcagg
gcagcagatggattcctttttgttgtgggctgtgacagaggaaagatactgtttgtttca
gaatctgtcttcaagatcctcaactacagtcagaatgatttgattggtcaaagtttattt
gattatctccatcctaaagacattgccaaagtgaaggagcagctctcttcttctgacacc
gcgccacgagaaagacttatagatgcaaaaaccggactcccggtcaagacagacatcacg
cccgggccctcgcgcctctgctccggggcacggcgctccttcttctgcaggatgaagtgc
aacaggccctctgtcaaggtagaagacaaggatttcccttcaacctgctcaaagaagaaa
gcagaccgcaaaagcttttgcactattcatagcacaggctacttaaaaagctggcctcca
acaaagatgggcctggatgaagataacgagcccgataacgagggctgtaacctgagctgc
cttgttgccatcgggaggctccatccccacgtggtgccgcagccggccaacggcgagatc
cgggtgaagcccaccgagtacgtgtcccggcacgccatcgacggcaagttcgtctttgta
gatcagagggcaacagccatcctggcatacttaccccaggaacttctaggtacttcgtgt
tatgaatatttccatcaagatgatatagcacatcttgcagaatgtcacagacaagttttg
cagacaagagaaaaaattacaactaactgctacaagtttaaaataaaagatggctctttt
attacgttgcggagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatac
attgtctccacaaacacagtggtttccaccacggtcctggagagcggggacgcggcgttt
ccgcagctggcggcgtccccacacagcatggacagcgtgctccaggctggagaaggtggc
cccaaaaggacccatcccactgtgcctggaattccaggtggaacaagagctggggcaggg
aaaatagggaggatgattgctgaagaaatcatggagattcacaggataagaggatcatca
ccttccagctgtggctcaagtcccctgaacatcaccagcacccccccgcccgacacgtcc
tcgccaggagggaagaagatcttgaatggtggcactccagacatttcttcagctgggctg
ctgtccgggcaaatccaggataattctgggtacccatattccgacaactcctctatcctg
ggggagaactcccacatcggcatggacatgatcgacacggagcagggctccagcagcccc
agcaacgacgaggcggccatggcggtcatcatgagcctgctggaggccgacgcggggctc
ggcggccccgtggacttcagcgacctgccctggcccctgtga
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