Amaranthus tricolor (tampala): 130796766
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Entry
130796766 CDS
T09367
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00240
Pyrimidine metabolism
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
130796766
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
130796766
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Motif
Pfam:
Indigoidine_A
Beta-AFase-like_GH127_cat
Autoind_bind
Motif
Other DBs
NCBI-GeneID:
130796766
NCBI-ProteinID:
XP_057515130
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Position
12:1989027..1997635
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AA seq
340 aa
AA seq
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MDSAAILRLANIRRHIQPEPCFSSSHYLKGDLIKLSPEVSDALSKGDAVVALESTIICHG
MPYPQNLETAKEIEAIVRDNGAIPATIAILEGVPHIGLQIEELERLAKTGAQVRKTARRD
IAAVVASRGDGATTVSATMFFASMVGISVFVTGGIGGVHRHGEQTMDVSSDLTELGKTPV
AVVSAGAKSILDIPRTLEYLETQGVCVAGYRTNEFPAFFTEKSGCKVSCSIDSPEDAARL
IEANAKLNLRTGILIAVPVPKEHSASGSFVESAIQRALAEAREQNIKGSAETPFLLSRVN
QLTGGASLASNIALVKNNANIGSKIAVCLAQLRACDQVKS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggattcagccgcaattttaaggcttgctaatattagaagacatatacaacctgaaccg
tgtttttcaagctctcattacttaaagggtgacttgatcaaattaagtcctgaagtttcg
gatgctttatctaagggagatgcagttgttgctttggagtccactattatttgtcatgga
atgccctaccctcaaaatttggaaactgcaaaggagatagaggcaattgtgagagataat
ggagctattcctgcaaccattgctatacttgaaggagttccacacataggtcttcaaatt
gaagagttggagaggcttgcaaagacaggcgctcaagttcgaaagactgctcgtcgtgat
attgctgcagttgttgcttcacgaggagatggtgctacaactgtctcagcaacaatgttt
tttgcttcaatggttggcatttcagtctttgttactggaggaattgggggagtacacagg
catggagagcaaaccatggatgtctcttctgatctcactgagctggggaagactcctgta
gcagtggtctctgctggtgctaaatcaatacttgacattcctagaaccctcgagtacttg
gaaactcagggagtgtgtgttgctggatataggaccaatgagtttccggccttcttcacc
gaaaaaagtggttgtaaggtttcttgtagcatagactccccggaagatgctgctcgttta
atagaagccaatgcaaaactcaatctcagaacaggtatactaattgcagttcctgttcca
aaagaacattctgcttcaggaagctttgttgaatctgcgatacagagagccttggctgaa
gcaagggagcaaaacataaagggcagtgctgaaaccccattcttgctttcaagagttaat
caactaactggaggagcttcacttgcttctaatattgctcttgtgaagaataacgctaat
attggttctaaaattgccgtttgtcttgcacaattgagagcatgtgatcaagtcaaatct
tga
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