Amaranthus tricolor (tampala): 130796943
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Entry
130796943 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130796943
KO
K20285
Rab9 effector protein with kelch motifs
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130796943
Membrane trafficking [BR:
atri04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130796943
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
KIAA1549
Itfg2
DUF702
Motif
Other DBs
NCBI-GeneID:
130796943
NCBI-ProteinID:
XP_057515376
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All DBs
Position
12:314738..319242
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AA seq
619 aa
AA seq
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MDSLGNLMGIEEKKAMWLYPKVIGSNNPSERWGHTACFFQTHVYVFGGCCGGMHFSDVLV
LNLETMSWTTLVTTGKGPGPRDSHTATMWRNRIVVFGGTNGSKKVNDLHILDLDSKEWVQ
PLCSGAYPSARESHTATLVGDDLLVVFGGSGEGVGNYLNDLHFLNLKTLSWTSPMVKGVA
PHPRDSHINVAVGRKVFVYGGDCGDRYHGDVDVFDIDTLTWSRFDVQGPSPGRRAGHAAV
KIGTKVYIVGGVGDKKYYNDAWVLDTTICSWSKLVICGQTPQGRFSHTAIVTNSDILIYG
GCGEDERPLGELLILQLGNEHSNGSYNISMCKSFGNHRNQRKKRGLSDAHQWQKTMLLGS
CIETEKKHELENFRTNKRRPITNLAYKMEPEQEEHSLSVSQNSSPSHSDQEQTTVQNQNQ
SLQFPSTNQPTKTPKKTQQALPDVYILGEHRPNQRHGNSLPLSHTVKTEVELLTAEGRHL
NQNITSNLIGAEVQGKVDGSFDSGYLMTATVNGRIFRGVLFAPGPNIMYNGASRGQSSFG
QFPVTQQCMNRESTHEKSPIFQPIRNAGVAFRHEPVQGNIMERSSSIFRDFPSRDKELRD
RSDLHGVVLTLGGPGNSHV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggattctttgggaaatttaatgggtattgaagagaagaaagcaatgtggttgtaccca
aaagttattggttctaataatccttctgaaagatgggggcatactgcttgcttctttcaa
actcatgtttatgtctttggaggatgttgtggtggtatgcacttcagtgatgtcttagtc
ttaaatctagaaactatgtcttggaccactctagtgaccacgggtaaggggccaggccca
cgagatagccacaccgccacaatgtggcggaacaggattgtagtctttggaggcacaaat
ggttctaagaaggtcaatgaccttcacatcttggaccttgactcgaaggagtgggtccaa
cccttgtgttcgggggcttacccttcagctcgggaaagtcacactgcgaccttagtagga
gacgatctattagtcgtgttcggtgggagtggagaaggtgtaggaaactacttgaatgat
ttgcacttcttgaatcttaagaccttgagttggacttcccctatggtcaagggtgttgca
cctcatccgagagatagccatatcaatgtggcggttgggaggaaggttttcgtctatggt
ggagattgcggggatcgttatcatggtgatgtggatgtgtttgatatcgataccttgaca
tggtctaggttcgatgttcaaggaccttcacctggtcggagagcaggacatgctgctgtg
aaaattgggaccaaggtgtatattgtaggcggagttggagacaagaaatactacaatgat
gcttgggtcttggacactactatatgttcatggtcgaagcttgtgatttgtggccagacg
cctcaagggcgattttctcataccgcaattgttacaaactccgacatcctcatatatgga
ggttgtggagaggacgagcgccctttaggagaactcctgatattacaactcgggaacgag
cattcaaatggcagctacaatatttccatgtgcaagagcttcggaaatcacaggaaccaa
cggaagaaaagaggattgtcggatgctcatcagtggcagaagacaatgctgttaggaagt
tgcattgaaacagaaaagaaacatgagctagaaaatttccgaacaaataaaagacggccc
ataacaaatcttgcatacaagatggaaccagaacaagaagagcattcgctttcggtctca
caaaattcctcgccatctcactctgatcaagagcaaacaactgttcaaaatcaaaaccag
agtttacaattcccctccacgaatcaaccaaccaaaactccgaagaaaacccaacaagct
ctgcccgatgtctacatcttaggagagcatcgaccgaatcaaagacatggtaattccttg
ccgttgtcacatactgtcaaaaccgaggtggaactcctaacagcagaaggcagacatcta
aaccaaaatatcacctcaaatttgattggagctgaagtgcaagggaaagtggatggatcc
tttgattctggttacctaatgacagcaaccgttaatggaaggatatttcgaggggttcta
tttgctccgggaccgaatatcatgtacaatggagctagtcgaggccagagtagcttcggt
cagtttcctgttactcagcaatgtatgaaccgagaatcaactcatgaaaagagtccaatc
tttcagcccataagaaatgctggtgtagcattcaggcatgaacccgttcaaggaaacatt
atggaacgctcttcatccatctttcgtgattttccatcgagggataaagagttgagagat
agaagtgatcttcatggcgttgtcctaacattaggaggaccggggaatagtcatgtatga
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