Amaranthus tricolor (tampala): 130797241
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Entry
130797241 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130797241 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130797241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130797241
Spliceosome [BR:
atri03041
]
Complex C
Other components
Step II factors
130797241
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
PolyG_pol
DUF4775
Motif
Other DBs
NCBI-GeneID:
130797241
NCBI-ProteinID:
XP_057515745
LinkDB
All DBs
Position
1:complement(903367..907413)
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AA seq
430 aa
AA seq
DB search
MDLIKQEIMKKKQDLAKETGGKRFFKRSEIEQKRLQKFREEEKREAEEKSQRQQQESSSS
STASLLDLIYSTKPNADSSTKTTTLTTEEQNNIDELNLSKQEVIRRLRLLKQPITLFGED
DQARLDRLKYVLKTGIFEVDSDMTEGQTNDFLRDIIELKKRQKTGMLSDRKRKSEDLEDG
EGGKGDDELSGDGGSGFDADKDIALMKARFEDLCEEDKILVFFKKLLNEWRQELDEMQDL
NRRTAKGKQMVATFKQCARYLSPLFKFCRKRALPDDIKASLMFIVDCCGKRDYRTAVDHY
IKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHVMNDETTRKYLQSVKRLVTFCQRKY
PTVPSKSIEFNSLANGSDLQALLMDEHHATGGGNQVQEEMLQLPAPSALRLFYLGKRWAW
HLNMVGEAGS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatctaataaaacaagagattatgaaaaagaaacaggatctagctaaggaaacaggt
gggaaacgattcttcaagcgatctgagattgagcagaagcgccttcagaaattccgcgag
gaagagaagcgtgaagctgaggagaaatcccaacgccagcagcaggaatcctcttcctct
tccactgcctcactccttgacttgatatactctaccaaacctaatgccgattcctccact
aaaactactactttaactacggaggagcagaataacattgatgaactaaacctctcgaag
caagaagtgattcggcgtcttcgacttctgaagcagccaattaccctttttggagaagat
gatcaggctcgtttagatcgattgaaatatgtcctgaagacgggtatctttgaggttgac
agtgacatgacagagggccagacaaatgatttcttaagagatattattgaattgaagaag
aggcagaagactgggatgttgagtgatcgcaagaggaaaagtgaagatttggaggatggg
gagggaggtaagggtgatgatgagttaagtggggatgggggctctggttttgatgccgat
aaggacatagcactaatgaaggcaagatttgaggatttgtgcgaggaagataagattttg
gtatttttcaagaagctgttgaatgaatggaggcaggagttggatgagatgcaggatttg
aacaggcgtactgcaaaaggaaagcaaatggttgctacttttaagcaatgtgctagatac
ttgtctcctttattcaaattctgcagaaaaagggctctaccagacgacatcaaggcatct
ttgatgttcatcgtggattgctgtggcaagagagactatcgaactgctgtggatcattat
attaagctggccattggaaatgctccatggcccataggggttactatggttggtatccat
gaacgttctgctcgggagaaaatttataccaatagtgttgctcatgtcatgaatgatgaa
accacccgcaaatacctacagtctgtcaaacggctggtgactttttgtcaacgcaagtat
ccaactgtgccatctaaatcaattgaatttaatagcttggcaaatggtagcgacttacaa
gctctacttatggatgagcatcatgcaacaggaggagggaatcaagtacaggaggaaatg
cttcagttgcctgctccaagtgcgcttaggctcttctatctgggaaagcgatgggcttgg
caccttaatatggtaggcgaggctggttcataa
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