Amaranthus tricolor (tampala): 130797488
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Entry
130797488 CDS
T09367
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130797488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130797488
03019 Messenger RNA biogenesis [BR:
atri03019
]
130797488
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
130797488
RNA polymerase I system
130797488
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
130797488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
130797488
NCBI-ProteinID:
XP_057516074
LinkDB
All DBs
Position
13:17441908..17448929
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AA seq
114 aa
AA seq
DB search
MANVAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFGLDKDPERVAECTTPNFTG
LISVMDPSRSWAARWLRIGRFVPGCYTLAVSETLPEEFMNICEDERVQYVPPKR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtagctcaaattcctactagctttggccatgagcttcgagcttgtcttcgc
tgccgccttgtcaaaacatacgatcagttcagggaatcagggtgcgagaactgtcctttc
ttcgggttggataaagatccagagcgtgttgctgagtgcactactcctaactttactggg
ttaatttctgtcatggatccaagtagaagttgggctgctcgctggctacgaattggaaga
tttgttccaggctgctatacccttgccgtgtctgagacacttccggaggaattcatgaat
atatgcgaggatgagcgtgttcaatatgtacccccaaagcgctaa
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