KEGG   Amaranthus tricolor (tampala): 130797501
Entry
130797501         CDS       T09367                                 
Name
(RefSeq) endoribonuclease Dicer homolog 3
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atri03036]
    130797501
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    130797501
   microRNA pathway
    RISC loading complex
     130797501
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 PAZ DND1_DSRM dsrm DJ-1_PfpI
Other DBs
NCBI-GeneID: 130797501
NCBI-ProteinID: XP_057516088
LinkDB
Position
13:17844976..17854631
AA seq 993 aa
MDILDDRHIDGCDETDQKLKGNALAGAGTTKRKELHGIINVRALSGTWINNLHGAVFHVY
KIDFSCDVEQYSSFVLLTESKLDVDIANVKVDLYLLDKTAKASVVPCGEVHLGSDKIKQA
MRFHELLFNGLFGKLFLGSKGRGTGREFLLQNDSDLLWSTSYMYLILPLESSDGLDQESW
KINWKEIESCVSVVEFLKKSAWLSAEQSGSKYRGFRDDLCSENMNISGEDVVHLANCSLS
RGNLKESVVMSIHTGRIYYVLDILVDTSSESPFDSDVGGKPSKKYSSFADYFNKKYGIVL
FYPGQPLLLLKQTHNPFNLLSDSEASELRRKKLSSRKLDDANQLNLVRMPPELLVHVDVH
VSVLRAFYLIPSIIHRMESLMLACQLREEIAYNFDDFHMPCSQILEALTTLRCCEDFSSE
RLELLGDSVLKYTVSCHLFLKYPEEYEGALSNHRQRTICNANLHVLGTNRGLQEYIRDSA
FEPRRWVAPGQLSAHPVPCSHGVNTTEVPLDSRYHSIDENIVLGKHCDRGHRWLVSKCIA
DCVEALIGSYYIGGGLKAALHVMNWLGIEAELGPFYVDKAITLASSQSCAQKLDHITALE
SKLGYDFVTKGLLLEAITHLTEQETGVGFSYERLEFLGDAVLDVLITRHLYHTHMDIDPG
ELTDLRSASVKNENFAQVSVRRNLYQHLQYNSDIISSQITEYLTLVSETSDSKLLQGREC
PKVLGDLLESIVGAVLIDTKLDVEEVWRIFKPLLSPIATPDNLDLPPFRELNELCDYLGY
FSKETCFTDKDGMFAELRLQLEGALLIGEGFGKTKKAAKGQAALHLLIELENRGISYDRC
FSKRKKKDAQDMSSVTVKKKYADVQSKKRKVVVLPGGNNKGASNATIPVIRAVNTEKGGP
RSSLYELCKTVQWPMPSFETSEHKSTSPIVMGEGSSKKTAYFIFMSKISLLIPDFGVLEA
DGEQRADKKSAQDSAALHLLLKLEQQGKLIISC
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggatattctagatgaccgtcatatagatgggtgtgatgaaactgatcaaaaactaaaa
ggcaacgcattagctggtgctggaaccacaaaaagaaaggagttgcatggaattattaat
gttcgtgccttatctggtacatggataaacaatcttcatggtgctgttttccatgtttac
aagatcgatttctcttgtgatgttgagcagtacagcagtttcgttcttctgactgagtca
aagctagatgttgatatagctaatgtcaaagtagatttatatttactcgacaaaactgct
aaagcatcggttgtcccatgtggcgaagtacatctgggatcggacaaaataaagcaggca
atgcgctttcatgaacttttatttaatgggttgtttggtaaattgtttcttggatcaaaa
ggaagaggtaccggacgagagtttcttctccaaaacgatagtgatcttctatggagcaca
tcatacatgtatttgatcttaccacttgagtcatcggatggcttggatcaagaatcttgg
aagatcaactggaaggagattgaatcctgcgtctctgtggtagaatttctgaagaaatct
gcttggttgagcgctgagcagtccggaagcaaatataggggttttagagatgacctttgt
tcagaaaacatgaacatctcgggtgaggatgttgtacatctggctaactgctcattgtcg
agaggaaacttgaaggaatctgtcgttatgtccattcacactggtcggatatattatgtt
ctcgacatcttggtcgatacgtcttctgagagtcccttcgattctgacgttggaggaaaa
ccatcaaaaaagtattctagttttgctgattacttcaacaaaaagtatgggattgtgctg
ttttatccagggcagccgttgttgcttctgaaacagactcataatccattcaatcttctc
tcggatagtgaggctagtgagttgcgtcgaaagaagctttcaagtcgcaaattggatgat
gcaaatcaactgaatcttgttcgtatgcctcctgagctcttggttcatgtagatgtccat
gtatcggtgttaagggcgttctatttaataccttcaataattcatcggatggaatctctg
atgttagcttgtcagctacgggaagagattgcgtacaattttgacgactttcatatgcca
tgctcgcaaattttggaagcacttacgactctaagatgctgtgaagatttctcttcagaa
cgtttggagttgctcggtgattcggtgctgaagtatacagtgagctgtcaccttttcctt
aaatatcctgaggagtatgaaggagcgttatccaatcatcgtcaaagaactatttgcaat
gcgaacttgcatgttttgggaactaatcgtgggttacaagagtacattcgcgatagtgca
tttgagccccgtcggtgggttgcccctgggcagctttctgcccatcctgttccttgttca
catggtgttaacacaactgaagttccgttggatagtcgatatcatagtattgatgagaat
attgtactcggaaagcattgtgataggggacaccggtggttggtttccaaatgcatagcg
gattgtgttgaagccctgattggatcatactatatcggtggtggattaaaggccgctctt
catgtcatgaattggctaggaatcgaagctgaattgggtccgttttatgttgacaaggct
attactcttgcatctagccaatcttgtgcgcaaaagcttgatcatatcacggccttagaa
tcgaagcttgggtatgactttgttaccaagggactgctactcgaagctattactcattta
acggaacaagaaactggggtgggtttttcctacgagaggctggaatttcttggggatgct
gtgctcgatgtgctgataacccgacatctatatcatactcacatggatattgatcccggg
gagttaactgacctgcgctcagcttctgtgaaaaacgaaaattttgctcaagtttctgtg
aggcgaaacctatatcagcatcttcagtataattctgatattatttcgagtcaaataaca
gagtatcttacgttggtttctgagacatcggattctaaattactgcaaggaagagaatgt
cccaaggttcttggcgacctgttggaaagtattgtcggggctgtactaattgataccaag
cttgatgtcgaagaagtttggagaatcttcaaaccattgttgtctcccattgcaactcct
gataatctcgatttgcctcccttccgtgaactgaatgaattgtgcgattaccttgggtac
ttctcgaaagagacctgtttcaccgacaaagatgggatgtttgcagaattgagattacag
ctggaaggtgctttattgataggggaaggattcggtaaaactaaaaaagccgccaaggga
caggcggctcttcatttgttgattgagctggagaacagagggatatcgtatgatagatgc
ttttcgaagaggaaaaagaaagatgcacaagatatgagttcagtcacggttaaaaagaag
tatgcagacgttcaatcaaagaagcgaaaggtagttgtgttgcctggtggaaataataag
ggggcttcaaatgctactattcctgttattagagcggtaaacacagagaaaggtggaccg
agaagctcactgtacgagttatgtaaaacagtacagtggcctatgcctagcttcgaaact
tctgaacataaatcaacatcgcctattgtaatgggcgaaggttcaagtaaaaaaactgcg
tattttatatttatgtcgaaaatctcgttgctcatacccgactttggtgtattggaggcg
gatggagagcagagagctgacaagaaaagtgctcaagattctgcagcattgcatctgctc
cttaaacttgaacagcaaggcaagcttataatcagctgttaa

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