KEGG   Amaranthus tricolor (tampala): 130797574
Entry
130797574         CDS       T09367                                 
Name
(RefSeq) uncharacterized protein LOC130797574
  KO
K11797  PH-interacting protein
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130797574
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     130797574
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st Bromodomain Beta-prop_DCAF4 Beta-prop_HPS5 WDR90_beta-prop_4th VPS8_N WD_LRWD1
Other DBs
NCBI-GeneID: 130797574
NCBI-ProteinID: XP_057516180
LinkDB
Position
13:complement(3375521..3390406)
AA seq 1564 aa
MDVRKYPPSNYVPSHHMKTSCTLNKLPESHKFEGRERATGRAVVADKLPDNVFFEEQERV
TGNAVAGAAYVDIDLREVYFLIMHFLSVGPCQKTSAQFLNELMEHQLLPRRYHAWYSRTQ
VPSGSEDDDGVSLPLTYDNLLHRYPHIAKDHLVRLLKQLMLRSPRPSLGIGTGPNAADVP
TLLGTDSFSLLSCDRNTEKKQVKLLPRYLRWPHMQVDQVHALHLRAIGGGFTRHHRAASI
HAACYAVAKPLTMVQKMQNIKRLRGHRNAVYCAIFDRVGRYVITGSDDRLVKIWSMETAF
CLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGLPISILQGHSGAVTAIAFS
PRTAYQLLSSSDDGTCRIWDARNSQLKPRIYVPKPADSGTGTSQENHQILCCAYNANGTV
FVTGSSDTFARVWNAPKFCADEPQQPYNEIDLLAGHENDVNYVQFSGCAIIARSVTSDTV
KDDHSLKFKNLWFSHDNIVTCSRDGSAIIWVPRSRRSHGKVGRWTKAYHLKVPPPPLPPQ
PPRGGPRRRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHTESTY
VLDVHPFNPRIAMSAGYDGKTIIWDIWEGTPVRVFEIGRGKLVDGKFSSDGTSIVLSDDI
GQIYLLNTGQGESHNDAKYDQFFLGDYRPLIRDTLGNVIDQESQLNPYQRNIVDPLCDSS
MIPYPEPYQSMYQRRRLGALGVEWRPSNVKFAVGPDFSLGEDYQIVPLPDPEAIIDIPEL
LDATLWEPEHEARSDDSDSEYDVAEECSSAKEKESLGTSSFDDTDSDAENFDYKQKQKDG
LRRSKRKNERIEVGFTASGRRIRRKRVEDCNETSSQSNKSKRLRSRKASKTKPFKAKLSR
PQRAAARNALNVFSTSSFGDEDGGSEDDSSDSESFSQDSVIQDDEPYLDFHNTLDRGVEK
AFFEDSSTVMDPIEPSEHQPAIGNKKKLVLKLCFRDTKKSFPENDSKIHVGSSSDLPQVE
EDEKARSNNEDVDLHPPVATNEKPIQSANRVKIRCKGWSENHTSSSTGVNDVFTPDRVSA
DCDILMEGSRHERLERGSEGDGGICNDKSYELKDHAQPIPTRIKIKSSGSLKQEKTPKLK
LVTGKKKLLAAEGSSVPNTISHDSGVDESNYNTGHYGHYLGADFPDAETDMVRRTRSIEI
KASTCKDGQVNHKLKLSKFDRLAGTSKSSEDSSRDYMSRSSRRQDIFDEDDQEPPSTSQS
NGSIGKISWLMLSEHEPGYRYIPQLGDEVVYLRQGHQEYIENYNPSDRGPWVTMKGWIND
VETCLVEGLDYSHVPGSGESCCKLILKFIDSSSSVCGKSFKLTLPELLQTPDFLVEKTWY
DFSVSRHWSPGDTCSVWWRHGVEEGGSWWEGRIISVEPKSMDFPDSPWDRYAILYQGDPT
PQLHSPWELHDSNYRWEPPHMNFDTRNKLLDILSKLERKKQDYGMLNLEQVSQRPDFLNR
FPVPLSPSVVRSRLTNNYYRSVKAVKHDIDIMMSNATSYFVRNLEQSKKMQRMADYFERT
LSNL
NT seq 4695 nt   +upstreamnt  +downstreamnt
atggatgtcagaaaatatccaccctccaattatgttccttctcatcacatgaagacatcc
tgcactttaaataagctgccagaaagtcataaatttgaagggcgagagagagctactggc
cgcgctgttgttgctgataagttgccagataatgttttttttgaagaacaagaaagagtg
acgggtaatgcagttgcaggtgcagcttatgtggatattgatcttagagaagtttacttc
ttgatcatgcattttttatctgttgggccatgtcaaaaaacttctgcacaatttttgaat
gaacttatggaacatcaactcttgcccagaagatatcatgcttggtattcaagaactcag
gttcccagcgggagtgaggatgatgacggtgtctcacttcctttgacatatgacaatttg
ttgcataggtatccccatattgcaaaggatcaccttgttaggctattgaaacagctgatg
ctgcgttcccctcgtccatctcttggaattggaaccggtcctaatgctgctgatgttcct
actttgttggggactgattccttttctttactgagttgtgatagaaataccgagaagaag
caagtcaagcttctgcctcgttatttgcgttggcctcatatgcaggttgatcaagttcat
gcattgcatttgagggctattggtggtggatttacacggcaccatcgtgctgcatcaatt
catgctgcatgttatgccgtcgcaaaaccgttaactatggtgcaaaagatgcaaaacata
aagaggcttaggggccatcggaatgctgtttattgtgctatatttgatcgtgtaggaagg
tatgtaattactggatctgatgaccgccttgtaaaaatttggtcaatggaaactgcattt
tgcctggccagctgccgtggccatgagggggatatcactgatttagccgtaagctcaaac
aatgctttggtggcatctgcatcaaatgactttgtcattcgagtgtggcgtttgccagat
ggacttccaatatccatattacagggccacagtggtgctgttactgcaattgcatttagt
ccaaggactgcataccaacttttatcttcgtcagatgatggaacttgtaggatttgggat
gctaggaattcacagttgaagcctcgaatttatgtgccaaaacctgcagattctggaact
ggtacctctcaggagaatcatcaaatattatgctgtgcatataatgctaacggaacggtc
tttgtgactggtagctctgatacttttgccagggtttggaatgctcccaagttttgcgcg
gatgaaccacaacaaccatataatgagattgatctgttggctggacatgagaatgacgtt
aactatgtgcaatttagtggttgtgctattatagcgagatcagtcactagtgatactgtg
aaggatgaccactcactaaaattcaaaaatttgtggtttagtcatgataatatagtaaca
tgttctcgtgacggaagtgcaatcatttgggtacccaggtcgcgtagatcacatggaaaa
gtcggacgttggactaaggcgtatcatcttaaggtgcctcctccaccgttaccccctcaa
ccaccccgtgggggaccacgccggagaattcttccaactccacgcggtgtgaatatgatt
gtatggagtcttgataatcgtttcgtgcttgctgctattatggattgcagaatatgcgta
tggaatgctgcagatgggagcttagtgcattgtttgactggtcacacggaatctacatat
gttttagatgtgcacccatttaatcctcggatagctatgagtgctggttatgatggaaag
accataatatgggatatatgggaagggaccccggttcgagtatttgaaattggacgtggt
aaactggttgacggaaaattctcatcggatggaacatcaattgtactctcagatgatatt
ggtcaaatatacctactaaacactggccaaggggaatctcacaatgatgccaagtatgac
cagttcttcttgggagattatcgccctcttatacgggatactctcggaaatgttattgac
caggagtcacagttgaacccgtaccaaagaaatattgtggaccctctttgtgattcaagc
atgattccatatcctgaaccttatcaaagtatgtaccaacgccggcgtcttggagcactg
ggtgtggagtggcgtccatccaatgtaaaatttgctgttggcccggatttcagcttaggt
gaagattatcaaattgtgcccttgccagacccagaagcaattattgatattccagaacta
ttggatgctactttatgggaaccagaacatgaagctaggagtgatgattcagattcagaa
tatgatgtggcagaagagtgttccagtgccaaagagaaggaaagtttaggtaccagctcg
tttgatgatacggactctgatgctgagaactttgactataaacaaaagcagaaagatggc
cttcgtagatccaaaagaaagaatgagagaattgaagtcgggtttactgcttctggaaga
cgtattaggaggaagagagtggaagattgcaacgaaacctcttcccagagcaataagagt
aagagattaagaagtcgtaaggcttcaaaaactaagccttttaaagctaaattatccaga
cctcaaagagctgcagctaggaacgcattgaatgtgttctctacgtcttcatttggtgat
gaagatggtggttctgaagacgattcatcagatagtgagtcattttctcaagattctgta
attcaagatgacgagccttatctggattttcataacacgctggatcgaggtgtagaaaaa
gctttctttgaagattcttcaactgtgatggatccaattgagccctctgaacatcagcca
gctattggaaataaaaagaaattggtgcttaaattatgttttcgtgatacgaaaaaatct
tttcctgaaaatgacagcaaaatacacgtgggatcttcatctgatctgcctcaagtagag
gaagatgaaaaggccagatcaaataatgaggatgttgatttacatcctcctgttgcaact
aacgaaaagccaattcaaagtgcaaacagagtaaaaattaggtgtaaaggatggtctgaa
aatcatacgagttcgtctacgggtgttaacgacgtcttcactcctgatagggtgagtgca
gattgtgacatcctaatggaaggttctcgccatgaaagacttgaaagaggatccgaaggg
gatggtggcatctgtaatgataaatcttatgagttgaaagatcatgcacagcccatacct
acaaggatcaaaataaaatcaagtggaagcttgaagcaagagaaaacacctaaactaaaa
ttggtcactggtaaaaaaaagcttcttgctgctgaaggttcttcggtgccaaacaccatt
agtcatgatagtggtgtggatgaaagtaattacaatacaggccactatggacattattta
ggcgctgattttcctgatgcagaaactgatatggtacgcagaactaggtctattgagata
aaggcaagcacatgcaaggatggacaagtaaaccataaattgaagttgtcaaagtttgac
agattagcggggacatcaaagagctctgaggattcgtccagagattacatgtccagatct
tctaggaggcaagatatctttgatgaagatgatcaggaacctccaagcacaagtcagtct
aatggttctattgggaagatctcgtggctgatgttgtccgagcatgaaccaggctaccgt
tatattcctcagcttggagatgaagtagtatacttgagacagggccatcaagaatatatc
gagaactataacccatctgacaggggtccctgggtaacaatgaagggatggattaatgat
gttgagacctgcctggttgaagggcttgattactcccacgttcctggctctggagagagc
tgttgcaagctgatattaaagttcatagatagttcttcatctgtgtgtggaaaatccttt
aagttaactcttccagagctgcttcaaacccctgattttctggttgagaaaacatggtat
gacttttctgttagtagacattggagtcctggagatacgtgctcggtatggtggaggcat
ggagttgaagaaggcggtagctggtgggaaggtcggataatttctgttgaaccaaaatct
atggactttcccgatagtccgtgggatagatatgccattctgtatcagggtgatcctact
cctcagttgcatagtccatgggaattgcacgattccaattaccggtgggagccgccacat
atgaattttgatacaagaaacaagttacttgatattctttcaaaattagagagaaaaaag
caggactatggtatgcttaatttggagcaggtctctcaaaggccggatttcctaaatcgg
tttcctgtgccgttatctccaagtgtggttcggtcaaggctgacaaataactattaccgg
agtgtgaaagcagtaaaacatgatatcgacatcatgatgtccaacgctacgtcatatttt
gtgagaaacttagaacaatcgaagaagatgcaacgcatggccgactacttcgaaagaaca
ttatcaaatttgtga

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