Amaranthus tricolor (tampala): 130797622
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Entry
130797622 CDS
T09367
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130797622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130797622
03051 Proteasome [BR:
atri03051
]
130797622
Membrane trafficking [BR:
atri04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
130797622
Proteasome [BR:
atri03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
130797622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
UN_NPL4
Dsc3_N
Ubiquitin_5
Ubiquitin_2
Rad60-SLD_2
UBA_HOIP
TBK1_ULD
Baculo_F
Motif
Other DBs
NCBI-GeneID:
130797622
NCBI-ProteinID:
XP_057516271
LinkDB
All DBs
Position
1:complement(1336328..1344243)
Genome browser
AA seq
546 aa
AA seq
DB search
MGAEGDSSETINIASEEVSVNIRCSNGTKFTVKTTLDSNVGTFKSLVAQNCDVPAEQQRL
IYKGRILKDDQTLESYGLQSDHTIHMVRGFAASPSTAPATTNSVASDTTPTATPIVAPTE
SGGLGGAGLGASLFPGLGLGGLGGTGAPGLLGAGLPDFEQMQQQLTQNPNMMREIMNMPA
IQSLMNNPDIMRNLIMSNPQMREIIDRNPELGHILNDPSILRQTLETARNPELMREMMRN
TDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGADAGNNMGSNPLAALLGNQGAIG
GQHRDGSNPSTTGSESASPNTNPLPNPWNAGGGTQTNSAPRVNPSGDTRPPPLGGLGSLP
ELDRMLGGLPDASMMTQMMQNPAISQMMQSMLSNPQYMNQMLNMNPQLRALTDSNPQIRE
MLQNSDVLRQLASPEMMQQMLTLQQSLLSGMNRPQANQDQSPNAGAAGNANNLGLDMLMN
MFGGLGAGGLTTPENSNVPPEELYATQLTQLQEMGFFDTAENIRALQATRGNVHAAVERL
LGNMGQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgaaggagattcaagcgaaaccatcaatattgcttcagaagaagtttctgtc
aacattcgatgttctaatggcaccaaattcaccgtgaaaacgacacttgattcgaatgtc
gggactttcaaatcactcgtcgcacaaaattgcgatgttcctgctgaacaacagaggttg
atctacaaaggtcggattcttaaagacgaccaaaccctagaaagttacggattacaatct
gatcatactatccacatggttcgtggttttgctgcatctccatcaactgctcctgcaact
acgaattctgtggcttctgatactactcccactgctactcctattgtggccccaacagaa
agtggaggcttagggggtgctggtcttggggcatccttgtttcctgggcttggtctgggt
ggtcttggtgggactggggctcctggtttgcttggagctggacttccagattttgaacag
atgcagcagcaactgacccaaaacccaaatatgatgagggaaattatgaacatgcctgcc
attcagagtctgatgaataatcctgacattatgcgaaacttgattatgagcaatcctcaa
atgcgtgagataattgatcggaatccggagctgggccatatattgaatgaccccagtatt
ctaaggcagacgctagaaactgctaggaatcctgagcttatgcgtgagatgatgcgaaac
actgaccgagctatgagcaacattgaatcatctcctgaaggttttaacatgctgagacgc
atgtatgagaatgtacaggaaccatttctgaatgccaccacaatggctggggctgatgca
ggaaataatatgggttcaaacccgttggctgcccttttgggaaatcagggtgctattggt
ggccagcatagagatggttcaaatccatcaaccactgggtctgaatctgcatctccaaat
actaatccacttccaaatccttggaatgccggaggaggtacacagacaaacagtgctccc
agggtaaatccttctggtgatacaaggcctcctcctctaggtggtttaggtagtcttcct
gaattggatcgaatgcttgggggacttccagatgcatcaatgatgactcagatgatgcaa
aatcctgcaatctcacagatgatgcaaagtatgctatccaacccacaatatatgaatcag
atgcttaatatgaatccacagttgcgtgctttgactgattcaaaccctcaaattcgagaa
atgttgcagaactctgatgttcttcgtcagttagcttctcctgagatgatgcagcaaatg
cttactttgcagcagtcacttctgtctggaatgaaccgccctcaggcaaaccaagatcaa
tcacctaatgcgggtgctgcaggaaatgcaaacaatttggggctggatatgttaatgaat
atgtttggtggtcttggagctggcggtttaaccacaccagagaattcaaatgtcccacct
gaagaactctatgcaactcaattaactcaacttcaagaaatgggattttttgacaccgca
gagaatattagggctctacaagctactcgtggtaatgtccatgctgcagtagagcgactt
ttgggtaatatgggtcagtga
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