Amaranthus tricolor (tampala): 130797734
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Entry
130797734 CDS
T09367
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130797734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130797734
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
130797734
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
130797734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
130797734
NCBI-ProteinID:
XP_057516446
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All DBs
Position
13:10000530..10011882
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AA seq
818 aa
AA seq
DB search
MGGSSEQLINGGSSSSPIKRFGITKPISLAGPTEADLLRNAELGKVLVHLGLFESKGEGE
KREEVLNRIREIVKGWVKQLTRQRGYTDQMVEDANALIFTFGSYRLGVHGPGADIDTLCI
GPSYVNRDEDFFVILHDILAEMEEVTELQPVPDAHVPVMKFKFQGVSIDLLYASVSMLVV
PDDLDISQGSILFNVDEPTVRSLNGCRVADQILKLVPNVEDFRTTLRCVKFWAKQRGVYS
NVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTQWRWPNPVMLCPIEEEDLGFP
VWDPRKNHRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFEHGNKICQEIELNKAQW
SALFEPYLFFESYKNYLQVDIIAEDADSLLAWKGWVESRIRQLTLKIERDTFGMLQCHPY
PYEFVDTSKQCSHCAFFMGLQRKQGVKVKEGQQFDIRGTVDEFRQDVYMYMYWKPDMHMY
VSHVRRKQLPPYVFPEGYKRPRRHMSQQAEKMSDDVEGDSADPIDRPLKRRSDSQSGVLT
PSRIEKRASISPQRLESLSPEFSSRLYTPSPLSNGELGKPNPTPDFLSHSQDMSSSELLN
GDKSMSSHSMLLDEIDHKQDIVDSMSVVENEANTVESFPSDVTDHGTEAAFDICNRIKDA
CLLRKDEGISSFQNSQTESFRRAKDLIERAAKDDIDKVVAHCEETKGIENGIHFGSDAGI
QTLNQEESLQDDLCGADPGLRSDNGYMGGTVAFQGGSTEELESNTAADVAIETRGRTTNN
PKFLKKPITRHDFKNLILFVAKFGDHVCCLFSLAFHLF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaagctctgagcagcttattaatggcggaagttcttcttctcccattaaaagg
tttggtattacaaagccaatttctcttgcgggtcctaccgaagctgatcttttacgaaat
gctgaactgggaaaggttttggttcatttagggctttttgaaagcaagggtgaaggtgag
aagagagaagaggttcttaatcggattcgtgagattgtgaaaggatgggtaaagcaactg
actcgtcaaagaggatacacagatcaaatggtagaagatgcgaatgctctcatatttact
tttgggtcttatagactaggggtacatggacctggggctgacattgataccctctgcata
ggaccttcttatgtgaatcgtgatgaagacttttttgtaatattgcacgacattttggct
gaaatggaagaagttactgagcttcaaccagtcccagatgctcatgtccctgtaatgaaa
ttcaaatttcaaggtgtatcaatcgaccttctttatgcaagtgtatctatgctggttgtt
cctgatgatttggatatatcacagggctccattctttttaatgttgatgagcctactgta
cgtagtttaaatggatgccgagttgcagatcaaattcttaagttggttcctaatgttgag
gactttcggacaacactaagatgtgtcaagttttgggctaagcaacggggtgtctattca
aatgtgactggatttcttggtggtgtaaactgggctcttttagttgctagagtgtgccaa
ctttaccctaacgctgtccctagcatgttactttctcgattttttagagtttatacgcaa
tggcgttggccaaatcctgtgatgctttgtcctattgaagaggaggatcttggtttccct
gtgtgggatcctcgtaaaaatcatcgggaccgtactcatcatatgccaataataactcct
gcgtacccgtgcatgaactctagttacaatgtgtcgataagtacactccgggttatgatg
gagcagtttgagcatggtaataaaatttgccaggagattgagctaaacaaggcccagtgg
agtgccctttttgagccttatcttttctttgagtcgtacaaaaattacttgcaagttgat
attattgcagaagatgcagatagtttgttggcttggaaaggttgggttgaatcccgaatc
cgacagcttactttaaagatagaaagagatacatttgggatgttacagtgccatccttat
ccatatgagtttgtggatacgtctaaacagtgtagccattgtgctttcttcatgggcttg
cagaggaaacaaggggtaaaagtcaaagaaggtcagcagtttgatattcggggaactgtt
gatgagttcaggcaggacgtatatatgtacatgtactggaaacctgacatgcatatgtat
gtctcgcatgttcgtaggaagcagcttcctccatatgtctttcctgaaggctataaacgt
cctcgaagacacatgagtcagcaggctgaaaagatgtctgatgatgtggaaggggatagc
gccgaccctatcgatagacctctcaagaggcgttcagattctcagtcgggagttctgaca
ccatcgcgcattgagaagagggcatctataagtccacaacggctggaaagtctttctcca
gagttcagttctagattatacactccttcaccattgagcaatggcgaactggggaagccc
aaccctactcctgatttcctaagccactcgcaagatatgtcgtcatctgaactgctgaat
ggggacaaaagtatgagttcacatagcatgttgctagacgagatcgatcataagcaagat
attgttgatagcatgtctgtggttgaaaatgaagcaaatacagtggagtcgttcccaagt
gatgtcactgaccatgggactgaagctgcatttgatatctgtaaccgaatcaaagatgct
tgtctgcttagaaaggatgaaggaatttcgagctttcaaaattcccagacagaatctttc
cggagagcaaaagaccttatagaaagagctgcaaaggatgatattgataaagtggtggcg
cattgcgaagagaccaaaggaattgaaaatgggattcattttgggtccgatgctggcatt
cagactcttaatcaagaggagtctttgcaggatgatctatgcggggcagatcctggtttg
cgttctgataatggatatatgggtgggactgttgcttttcagggtggatccacagaagag
ctagagtcaaatactgctgctgacgttgccatagaaactcgaggtagaactacaaataac
ccaaaatttctgaagaagccaatcacaaggcatgattttaaaaatctcattctgtttgtt
gcaaaatttggtgaccatgtatgttgtttgttttctctggcttttcatttgttctag
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