Amaranthus tricolor (tampala): 130797740
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Entry
130797740 CDS
T09367
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
atri01001
]
130797740
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130797740
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130797740
Protein kinases [BR:
atri01001
]
Serine/threonine kinases: Other
Other
130797740
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130797740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
LisH
Motif
Other DBs
NCBI-GeneID:
130797740
NCBI-ProteinID:
XP_057516457
LinkDB
All DBs
Position
13:complement(10095157..10113459)
Genome browser
AA seq
1956 aa
AA seq
DB search
MEATSMDEQLPSISQQPSQSMPPPPPPPEQPEVSGGGGGDEEEEDEEEEEEDEDEGLISK
AQKFMEMITSSPDNPNPKALHALASLLETQESRYMEEADHSSSNQTRASFSIGRLGNLIR
ENDEFFELISSKFLSESRYSIAIQAAAARVLLSCSLTWMYPHVFEDDVTENIKNWVLEDN
SIYSSDEGAWKRQFGEKKCSDFDMRKTYSIGLLALCLTSGSQVVEDVLTSGLSAKLMRYL
RSRVLGETSSSLKDTSHVPESKGVSVGGGRCRDENRARLRAPLENAALDDSRILEDGGSA
DLGAERDHDRNSNRQVHEEEKWINGPPEGLPEDAGIYDADIDSENRWHGQDMHDGRIKTG
ERNGPGISLHEEDLAESTREDSARRKANRGSVRCRGKTRVIESTTEPEQSIMSPGSESRG
AQARSRERWLARNFDGKRVIDNKKSSSRSTSEGTATEREDTDECIQECRVGSKDISDFVK
AAVRAAEAEARAASAPLEAVRAAGEAAAELVKSTAMDEYKNTNDEEAAFAAASRAASTVI
DAANSIEVSRNSESVSADVPIGGEKEEAEDVEFFIPDSDTLAQQREKFSIQCLVLLGEYV
EVLGPVLHEKGVDVCLALLRRYSEEKKESEIVSFLPDVLKLICALAAHRKFAAVFVDRGG
IQKLLAVPRVLHTFFGLSSCLFTIGSLQGIMERVCALPSDVIHKLVQLALQLLDCPQDQA
RKNAALFLAAAFVFRAILDAFDSQDGLQKLLGHLHEAASVRSGVNSVTLGGTATGPLRND
RSNADVLTSSEKQIAYHTGVALRQYFRAQLLLLVDTVRPNKSNRSTARQIPSSRAGYKPL
DISNEAMDAVFVQIQKDRKLGPALVRARWPAVERFLACNGHVTMLELCQAPPVERYLHDL
LQYALGILHIVTLVPYSRKLIVNATLSNDRVGIAVILDAATGPGYIDPDIIQQALNVLIN
LVCPPPSISNKLPLLAHSQQSVSVQTSNAERNVSDRVVSVPSQSEVREKNVEPSTVDRSS
AMSNSLQSPATNLASGLVGDRRISLGVGAGCAGLAAQLEQGYCQAREAVRSNNGIKVLLQ
LLQTRVVLPPATLDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSEVIRDLGNQTPGT
EQNRWQTELTQAAIELIAIVTNSGRASTLAATDAATPTLRRIERASIAAATPISYHSREL
LLLIHEHLQACGLSTSSAALMKEAQLTPLPSLSAPSSLAHHASVQETPSIQIQWPSGRAL
GGFLNNRPKIQNEEVSSKCDSAVSSKKKPLVFSSSFNARSKCRPSPFELQTISISKGQSS
SRRAPGSAVPPETPLASTSETMVHAETHVKTPIVLPMKRKLTELKDVAPTSSAKRLNASE
HGLKSPVFQTPNSIRRGSLLSDLFGSVTPNSNFKDLYGRQTPSAGQFDHFDDSQCNDTPF
ASCQPGLSGDLQPANSERLTLDSIIVQYLKHQHRQCPAPITTLPPLSLLHSHVCPESRRS
LDAPSNVTARLSTREFRSMYGGIHGSRKDRQFVYSRFRPWRTCRDDAAALLTCMTFLGDS
SQIAAGSHSGELKIFDTTSNNILETCTSHQSPLTLVQSYPSHGTHLVLSSSSHDVKLWDA
SSIAGGPIQTFEGCKAARFGNTGTCFAALPTETSQREILLYDVATHQLDQKLSDTSSGPY
GRVHAYSILHFNPSDTMLLWNGVLWDRRAAGHVYRFDQFTDYGGGGFHPSGNEVIINSEV
WDLRKFRLLRSVPSLDQTVITFNSSGDVIYAILRRNLDDIMSVVNTRRCKHPLFSAFRTL
DAVNYSDIATIPVDRCVLDFATEPTDSFVGLVTMDDQDEMFSSARVYEIGRRRPPDDDSD
PDDVESEEDDDDDDDEDDVDLDPILGSGLDGDGDSEADDLSNDDSGTDIDDDDDGDFLVN
DADYDVGGELLEMMTGDEDEDYDSDTMGSFSSGDHL
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgacatccatggatgaacaattaccttcaatctcgcaacaaccatcgcagtct
atgcctccgcctccccctccaccggagcagcctgaggtttcaggcggcggcggaggagat
gaagaagaggaggacgaagaagaagaagaagaggatgaagacgagggtttgatttccaaa
gctcaaaaattcatggaaatgatcacttcttctcctgataatcctaaccctaaggctctt
catgcccttgcttctcttctcgaaactcaagaatccaggtacatggaagaagctgatcat
tcctcatccaaccaaactcgagcttcgttcagtattggacgtttgggtaatttaattcgg
gaaaatgatgaattctttgagttgatatcatccaaatttctatcagagtcgcgttactca
atagctatccaggctgctgctgcaagggtgcttcttagttgctctttaacttggatgtat
cctcatgtttttgaagatgatgttacagaaaatataaaaaattgggtgttggaagataat
tcaatttattccagtgacgagggcgcatggaagcgccaatttggtgagaaaaaatgctct
gattttgatatgcgcaagacctactcgataggccttcttgcgttatgcttaacaagtggc
agtcaagtagttgaagatgtcttaacttctggcttgtcagcgaagttgatgcgttatctt
cgtagtcgggttttgggcgagacaagtagcagtctgaaagacacaagtcatgtgcctgag
agcaaaggtgtttctgttggaggtggaagatgtagagatgaaaatcgtgccaggttacga
gcacctttggagaatgctgctctggatgattctaggatcctagaagatggaggttcagct
gatctaggtgctgagagggatcatgatagaaacagtaataggcaagttcatgaggaagaa
aaatggataaatggaccacctgaaggtcttcctgaagatgctggaatttatgacgcagac
attgatagtgagaaccggtggcatgggcaagatatgcatgatggtaggataaaaaccggg
gaaagaaatggtcctggaatatccttgcacgaagaagatttagctgaaagcacacgggag
gattctgccaggcgtaaggctaaccgtgggtcagtaagatgtagaggaaaaactagggtt
attgaatctaccaccgagcctgagcagtctattatgtcgcctgggtcagaaagccgtgga
gcgcaggcacgcagtagagagaggtggctagctagaaattttgatggtaagcgagtgatt
gataacaaaaaaagttcaagtagatcaacttctgaaggcactgctacggaaagagaagat
actgatgaatgcattcaagagtgcagagttggctccaaagacatctcagattttgtgaaa
gctgctgttagagctgctgaagcggaagcaagagctgctagtgcaccattagaagctgtc
agagccgctggagaggctgctgcagaactggtgaaaagtactgcaatggacgaatataaa
aatacaaatgatgaagaggctgcatttgcagcagcttcaagagctgcatccactgtgatt
gatgcagctaattcaattgaagtttcaaggaattctgaaagtgtcagtgcagatgtacca
atcggtggagagaaagaagaggctgaggatgtggagtttttcatcccagatagtgacact
cttgcacaacaaagggaaaagttttccatccagtgtcttgtgctcttaggagagtatgtt
gaagtcttagggcctgtgttgcatgaaaagggagttgatgtttgccttgcgttactacga
cgatattccgaggagaaaaaggaatcagaaattgtctctttcctgcctgatgtcttgaag
ctcatttgtgctttggctgctcatagaaaatttgctgcagtgtttgttgatcggggaggg
attcagaagctacttgctgttccaagagttcttcacactttcttcggcctttcttcttgc
ttgtttactattgggtctcttcagggcatcatggagcgtgtatgcgcgcttccttctgat
gtaatacataagctggttcagttggctcttcagcttctggattgcccacaggatcaagcc
cggaaaaatgcagctttattcttggctgctgcatttgtcttcagagccattcttgatgct
tttgattcccaggacggtctccagaaattacttggtcatttacatgaggctgcttctgta
agatcaggagtaaattctgtgaccttggggggtactgctacaggaccacttagaaatgat
cgatcaaatgccgatgtacttacatcctcagagaaacagatagcttatcacactggtgtt
gctttacgacagtattttagagcgcagttgctgctgctagtggatactgttcgtcctaac
aaaagcaatcgaagcaccgctcggcagattccaagctctagagccggttataagcctctt
gacataagtaatgaagccatggatgcagtttttgtccagattcagaaggaccggaagctt
ggtcctgctttggtccgagcgagatggcctgcagttgaaagatttttagcttgtaatgga
catgtgactatgctggagctatgtcaggctccacctgttgagcgatatttgcatgacttg
cttcaatatgcgttgggcattttgcatattgttacattggtaccatatagccgtaagctg
attgttaatgccacattaagcaatgatcgtgtcggtatagctgttattttggatgctgct
actggacctggttatatagaccctgatattatccagcaggcgttaaatgtgttaataaac
cttgtttgccctccaccgtcgatcagcaataagctgcctcttcttgcacatagtcagcaa
tctgtatctgtccaaacctcaaatgcagagagaaatgtctctgatcgagtggtttctgtg
cctagtcaaagtgaagtaagagagaaaaatgttgaacccagtactgtagatcggagttcg
gcgatgagtaattctttgcaaagtccagctactaatttagcctcaggattagttggcgat
cgtagaatttccttaggagttggagctggttgtgctggtcttgccgctcagttagaacaa
ggatattgccaagcaagagaggcagtccgttccaataatggtattaaggttcttttgcaa
cttcttcagacccgtgtggttttgccaccggcaactcttgattgtctacgtgcccttgca
tgtcgggtgttgcttggcttagcaagagatgataccattgcacacatattgacaaagctt
caggttggcaaaaagttgtcggaagtcatcagagatttgggcaatcagacccctgggact
gagcagaaccggtggcaaacagagttaacgcaagctgctattgagttaattgcgattgtg
acaaattcaggccgagcaagcactttagctgctaccgatgctgctactccaactcttcga
cgtatcgaaagagcttctatagctgcagctacccctatttcataccattcaagggaactc
ttgctgcttatacatgaacatctacaggcatgcggtttatctactagttctgctgctctg
atgaaggaggcacagttaacacctttaccatctttatctgcaccatcatctcttgctcac
catgcttctgttcaagaaacaccctctatacagatacagtggccatctggccgggctctt
ggagggtttcttaacaacaggccaaagatacagaatgaggaagtgagttcaaaatgtgat
tcagctgttagttcgaagaagaagcctcttgttttctcttctagctttaatgcacgatca
aaatgtcgcccttcacctttcgagctgcaaacaatttccattagtaagggacagagtagt
tcaagaagggcccctggatctgcagttcctccagaaactcctttggcatcaacatcagaa
acgatggttcatgctgaaactcatgtgaagacccctatagtgttgccaatgaaaaggaaa
ttgacggaacttaaagatgttgctcctacttcatctgcgaagcgattgaatgccagtgag
catggattaaagtctccagtatttcaaactcctaatagtattcgcagagggagtctatta
agtgacctctttggttctgtaaccccaaattcgaatttcaaagatttgtatgggcgacaa
acaccatcagctggccaatttgatcattttgatgacagtcaatgcaatgatactcctttt
gcttcttgccaaccagggctatcaggtgatttacaacctgcaaactctgagaggctgacc
ttagattccattattgttcagtacttgaagcatcagcatcgtcagtgtcctgctccaata
accactttgcctccgctttccctcttacattctcatgtttgccccgaatctaggaggagc
cttgatgccccatctaatgtgactgctcgtctttctactcgtgaattcagaagtatgtat
ggaggtatccatggatcaaggaaagatcgtcagtttgtttatagccggtttaggccatgg
cgaacttgtagagatgatgctgctgctcttctgacatgcatgacatttctaggtgattct
tcccagattgctgctggaagtcattctggggagctcaaaatttttgacaccactagtaac
aatattttggagacttgtaccagtcatcagtctcccttaacacttgtccaatcatatcct
tcccatggcacccatctagtgctctcgtccagttcgcatgatgttaagctgtgggatgca
tcttcaattgcagggggaccaatccaaacttttgaaggttgtaaagctgctaggtttgga
aacactgggacgtgttttgctgccttacctacggaaacatcccaacgtgaaatattactt
tatgatgtggcaacacatcagttggatcagaaattgtcagatacctcatctggtccatat
ggtcgagttcatgcatattctattttacactttaatccttcagatacaatgttgctttgg
aacggcgtcttgtgggatcgacgggctgctggtcatgtctatcgatttgaccagttcaca
gattatggtggcggcggctttcatccttctggaaatgaggttatcataaactcggaagtt
tgggatcttcggaagttcaggcttcttagaagcgtgccttctcttgatcaaactgtgatt
acatttaacagtagtggggatgtaatttatgctatattacggaggaatctagatgacata
atgtcagttgtcaacactcggcgttgcaaacatccactgttttctgcattccgcacgttg
gatgctgtgaactattctgatattgccaccatccctgtggatcgctgtgttctggacttt
gcaactgagccaacggattcatttgttgggttagtcactatggatgatcaagatgaaatg
ttctcgtctgctagggtttatgaaatcggtcgtcgaaggccacctgatgatgactctgat
ccggatgatgtagaaagtgaagaggatgacgacgatgatgatgatgaagatgatgtggac
ctagaccccattttaggctcaggcctggatggagatggtgatagtgaggccgatgatttg
agtaatgacgatagtgggaccgacatcgatgacgacgacgatggtgatttcctggtaaac
gatgcagattacgatgtaggaggtgagcttctagaaatgatgacaggcgacgaagatgaa
gattacgacagcgacacaatgggatcctttagcagtggcgatcacctgtaa
DBGET
integrated database retrieval system
