Amaranthus tricolor (tampala): 130797815
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Entry
130797815 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130797815 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130797815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130797815
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130797815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Zn_ribbon_RanBP
PBP1_TM
Zn_ribbon_15
Vps36-NZF-N
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
130797815
NCBI-ProteinID:
XP_057516564
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Position
13:11063995..11074887
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AA seq
672 aa
AA seq
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MSRKATYGFDYDDDYDDDYEDYDDYDHEEEEVVNHEEYGKYSYCIKSLSEEEVVNHEEYA
GVTREVVNSGVWRCSICTYDNEESMNYCEMCGVLRIPPSNSHDNIEKAETTGVPPRVFVK
TEATTVSSTRQVDTTFKKTSTPEDHNHVLTVNILRNTVMDEGPSSSKNSDKASSKNKKSK
HNSIDGSISLANGAESESLPSGLNNMSLNNKHVSSNILIPKKTLAQYKPEKWMLPDKEVG
EKDQLNLAIVGHVDSGKSTLSGRLLHLLGQISKKQMHKYEKEAKEQGKGSFAYAWALDDS
VEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILLIDASVGAY
ETGMDNIGGQSREHAQIIRSFGVDQIVVAINKMDVVEYSKERFELIKHQVGSFLGQCGFK
ESFISWVPLSAIENQNLVCSATDVRLNSWYKGPYLLDAIDSLRLPSRDYEKPLLMPICDV
VKAHSMAVSACGKLEAGALQIGSKVLVMPLGDTTSVRSIERNSQPCDIARAGENVSVVLQ
GIDVNHIIAGGVLCHPDFPVRVASRLELKILVLDVKIPILIGSQLEFHIHHAKEAARVVK
IVSLIDPKTGKETKKAPRCLLAKQRAVIQVALQGAVCVEDFSNCKALGRVFLRSSGRTIA
VGVVTQVLEDQN
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggaaagctacctatggatttgattatgatgatgattatgatgatgattatgaa
gattacgatgattacgaccatgaagaagaagaagttgttaatcatgaagagtatggtaag
tattcctattgtattaagtcattatctgaagaagaagttgttaatcatgaagagtatgct
ggagtgacacgagaagttgttaattctggggtttggcgctgttctatatgcacctatgat
aatgaagaaagtatgaactattgtgaaatgtgtggggttcttcgtatccctccgtctaat
agccacgacaatattgagaaagcagaaactacaggtgtgcccccaagggtctttgtgaag
acagaagctactacagtgtctagtacaagacaagttgacactacttttaaaaaaacaagc
actccagaagatcacaatcatgtcctcactgtaaacattttgagaaatactgttatggat
gagggtccctcgagctcaaaaaattctgataaagcttcctcaaagaacaaaaaatcaaaa
cataatagcatagatgggagtatttctctagcaaatggagcagaatctgaaagccttcct
agtggcttgaataatatgtcattgaataacaaacatgtatcttccaacattctgattcct
aagaaaacccttgcacaatacaaacctgagaagtggatgctacctgacaaagaagttggg
gaaaaggatcaactaaatcttgctattgttggccatgttgattctggaaaatcgacattg
tctggaagactcttacatctactgggccaaatatctaagaaacaaatgcataagtatgag
aaagaagccaaagaacagggaaagggatcatttgcctatgcttgggctcttgatgacagt
gttgaagaacgagagcgtggaataaccatgacagttgctgttgcgtattttgacaccaag
aaatatcatgtggttgtgctagattctcctgggcataaagatttcgttcccaatatgata
tcaggtgcaacccaagcagatgctgcaattctccttatagatgcctcagttggtgcatat
gaaaccgggatggacaatattggtggacaatcccgagagcatgcacaaattattagaagt
tttggagttgatcaaattgtagttgcaattaacaaaatggatgttgtggaatactccaag
gaacgatttgaattgatcaagcatcaagttgggtcttttctaggtcaatgtggcttcaag
gaatctttcatctcatgggttcctttgagcgctatagaaaaccaaaatttggtgtgttct
gctactgatgtgcgtctaaattcttggtacaaaggaccatatcttttagatgctatagac
tcgctacgcctgcctagtagagattatgaaaagcctttgcttatgcccatatgtgatgtt
gtcaaagcacattcaatggccgtttcagcatgtggtaaattggaggctggagccctacaa
attggatctaaggttctggttatgcctttgggggatacaacatcagttcgttccattgag
cgcaactcccaaccttgtgatattgcaagggctggagagaatgtttctgttgttttacag
ggcatcgatgttaatcatataattgcaggaggtgtcttatgtcatccagattttcctgtt
agggttgcatctcgcttggagttgaaaattcttgtcttggatgtaaaaatcccaattttg
attggttctcagctggaattccatatccatcatgcaaaagaagcggctagagttgtaaaa
atagtgtcattgatcgatcccaaaaccgggaaggagacaaaaaaggcacctcgctgtctt
ctagcaaagcagagggctgttatacaggtagctttacaaggagcggtttgtgttgaggat
ttctccaattgtaaagctcttgggagggtatttctacgttcatcaggaagaaccatagcc
gtgggtgttgtcactcaagtactggaagaccagaattag
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