Amaranthus tricolor (tampala): 130797845
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Entry
130797845 CDS
T09367
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130797845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130797845
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130797845
Membrane trafficking [BR:
atri04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130797845
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130797845
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130797845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank
PH
Ank_2
Ank_5
Ank_3
BAR
Ank_4
PH_8
PH_11
ANK_LRRK2
PH_20
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
130797845
NCBI-ProteinID:
XP_057516607
LinkDB
All DBs
Position
13:6626752..6643429
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AA seq
738 aa
AA seq
DB search
MAKFTVTLREIGTYKEVLRSQVENILNVKLLQFVNADLHDVKEARKRLDKAATMYDQARE
KVLSLKKSARKDTVAIIEEELHAARAFYDQARFNLVTALLHVEAKTHYEFLEAVSRSMDA
HLHYFKQGYELLLQMEPYMKQILDYAKQSKQSSNNELTSLNEKIKEYKRQIDQQNRQSVN
GSSDIPGVDCSLPFSKGTDKAIEEVMHSSTNGKIQTIQQGYLFKRSSNLRAHWKRRFFVL
DSRGILYYYRKPRSKASIGNSRFSGPLHGSVESGSALGLWISSHYNNVTINEEKSVARHT
VNLLTSTIKLDDEQSDMRFCFRIISPVKTYTLQAENAADQMEWVEKIRGVIASLLILQAV
DGDPTAMTDSGSSECSSIVNPSVTEEVSSNTSGHSYQQQRHCVRVEKPIELLKKVDGNER
CADCGAPGPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVRVWEPSVISLFQSVG
NVYANSVWEEFLHAENFSEEDERPIIFPKSEQHKPAFMKKPTHNDPIAVKELFIHAKYEE
KVFVRKKKANQTALSVSQEMWESVCANDKKAVYHLIICSEADVNSMHRQPSTAKSFFMSR
VKDSDEAPLIHDADRGREISLERTASRSWSSLAKGKDPFRESCFDGCTLLHLACQCTDVG
MVELLLQYGANMDVADSRGQTPLHYCITEQKADIAKVLLMRGAKGKTIDKEGKSAMQLAV
DLKLNDNEVMSLLKVCCS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttactgtcaccttaagagagattggtacgtacaaggaagttcttcgatca
caggtggagaacatattgaatgttaagctgctacaatttgtcaatgccgatctgcacgat
gtcaaggaagctcgtaagcgcttggataaggctgcaaccatgtatgatcaggctcgtgag
aaggttttatcgctgaaaaaaagtgctaggaaggatacagttgctattatagaggaggaa
cttcatgctgcaagagctttctatgaccaagcacgtttcaatttggttactgctctttta
catgtggaagcaaaaacgcattacgagtttttggaagctgtgagccgctcaatggatgca
catctacattactttaaacagggttacgagttgttgcttcagatggaaccttatatgaag
cagattcttgactatgcaaagcaatcaaaacaaagttccaacaatgagctcacgtctcta
aatgaaaagataaaagaatacaaaagacagatcgatcagcaaaataggcagtctgtcaat
ggctcatctgatattcctggagtagattgttcactacctttttccaaaggcactgataaa
gcaattgaagaagttatgcattcttctacaaatggaaagatacaaaccattcaacaagga
tacctgtttaagcgttcttctaatttgagggcgcactggaaacgaaggttttttgttctg
gatagtcgtgggattttgtactattatcgaaagccacgaagcaaggcttcaattggaaac
agtaggttttctggtccacttcatggttctgttgagtctgggtcagcacttggcctatgg
atttcttctcattacaataatgttacgattaacgaagaaaaatctgtggcacgtcacacc
gtcaacctgctaacatcaacaataaagcttgatgatgagcagtcagatatgagattttgc
ttcaggatcatctcgcctgtgaaaacctacaccttacaggcagagaatgctgcagatcag
atggagtgggttgaaaagataagaggagtaattgcttcattgttgatattacaagctgtt
gatggggatccaactgctatgacagactctggttcctctgaatgttcttccattgtcaat
ccatcagtcactgaagaagtttcttcaaatacttctgggcatagttaccagcagcaaaga
cattgtgtgagagttgagaaacctatcgagcttttgaaaaaggtggatggtaatgagaga
tgtgctgattgtggtgctcctggacctgactgggcttctttaaaccttggtatactcatt
tgcatagaatgttctggtgtacaccgcaatcttggtgttcatatatcaaaggtaaggtct
ttgacactggatgtaagagtgtgggagccttctgttatatctttgtttcaatccgtaggt
aatgtgtatgcaaattcagtctgggaagaatttttgcatgctgaaaacttttctgaagaa
gatgaacgaccaataatcttcccaaagtccgaacaacacaaaccggcatttatgaaaaag
cctacacacaatgatcctattgcagtaaaagagttattcattcatgcaaagtatgaagaa
aaagtttttgttcgcaagaaaaaggcaaatcagaccgccttatctgtgtcgcaggaaatg
tgggagagtgtttgtgccaatgataagaaagcagtttatcacctcattatatgctctgaa
gcagatgttaattccatgcatagacaaccgtctactgcaaaatcattttttatgtcgaga
gtcaaagattcagatgaagctcccctcatccacgatgctgatagaggaagagaaatatct
cttgagaggactgcctcgaggtcatggagctcactagctaagggaaaagatccatttcga
gaaagttgttttgatggatgtactctgcttcacttggcctgtcaatgtactgatgtaggc
atggtggaattgctcttacagtatggtgcaaacatggatgtggctgattcaagaggtcaa
acaccacttcattattgcattacagaacagaaagccgatattgcaaaagtacttctcatg
aggggagccaagggaaagaccattgacaaggaaggcaaatcggcaatgcaattggctgtg
gatttgaaactaaatgacaatgaggttatgagtcttttgaaagtttgttgcagctag
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