Amaranthus tricolor (tampala): 130797918
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Entry
130797918 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3 isoform X1
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130797918
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130797918
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130797918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
130797918
NCBI-ProteinID:
XP_057516689
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All DBs
Position
13:120647..129540
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AA seq
383 aa
AA seq
DB search
MSIRGVDFKWYDGFFLSMLATSVIIVAINWNRYHLCTYPLHIWIVVDYTTVFVFRLLMFL
DNGLAAGMGLDFGWQQRYARFCGRVAVLSFLSLVLYPFLWAWTVIGTLWFTKAKGCLPEE
GQKWGFLIWLMFSYSGLCCIAFFCVGKWLTRRQIQMLRAQQGGVPISEYRVLVDMIRVPD
WAFEAVGQEMRGMGQDAAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICL
EEFRVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALSNLRTDSELER
HSSTMVTTTQYVRAQTPSQSYRLRLHGLLRPVRTENAGPGNEPDNALEVAENGGLLTISG
PARVNPSPYPVEHDVAPSSALPH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtctatccgaggcgtcgatttcaaatggtatgatggatttttcttgtccatgctcgca
actagtgtaattatagtggccatcaactggaatcgctaccatctttgtacttatcctttg
cacatttggattgtggttgactacaccactgtttttgtattccggcttttaatgtttttg
gacaatgggcttgcagccggaatgggattggactttggctggcagcagaggtatgctcgc
ttttgtggtagagtagcagttctctcattcctctctctggtgttgtatccgtttctttgg
gcatggactgtgattggcaccttgtggttcaccaaagccaagggttgtttgcctgaagaa
ggtcaaaaatggggtttcctgatttggttgatgtttagttattcaggactttgttgcatt
gctttcttttgtgttgggaagtggttaacacgaaggcaaattcagatgctacgagctcaa
caagggggagttccaatatcagagtatagggtattggtcgacatgattcgtgtaccagat
tgggcatttgaagctgttgggcaagagatgagaggcatgggccaggatgctgctgcatac
catcctgggctttacttgactgcagcacagagagaagcagtggaagctcttatccaggaa
ctgccaaagttccggctgaaggctgttcctactgactgcagtgaatgccctatctgcttg
gaggagttccgggttggaaacgaggttcgtggcttaccttgtgctcacaactttcatgtt
gagtgcatagatcaatggctccgacttaatgttaaatgtccccggtgtcgctgctccgtt
ttccccaatcttgacctcagtgccttatccaatctccgtactgactcagaactggaacga
cattcatctaccatggtgaccaccactcaatatgtcagagcccaaacgcctagccaaagt
tatcggttgagattacatggtttgctgcgccctgttcgaactgagaatgcaggacctggt
aatgaaccagataatgccttggaagttgctgaaaatggggggttgcttacaatttcgggt
cctgctcgtgtgaacccctcaccctatcctgtcgagcatgatgttgcaccttcttcagcc
cttcctcactaa
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