Amaranthus tricolor (tampala): 130798160
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Entry
130798160 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130798160
04131 Membrane trafficking [BR:
atri04131
]
130798160
04121 Ubiquitin system [BR:
atri04121
]
130798160
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130798160
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130798160
Membrane trafficking [BR:
atri04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130798160
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130798160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
DUF629
Motif
Other DBs
NCBI-GeneID:
130798160
NCBI-ProteinID:
XP_057517025
LinkDB
All DBs
Position
13:complement(2962776..2968900)
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AA seq
440 aa
AA seq
DB search
MLQIRLNKGASLDNGTGVKLSPGEIVTVACPDHLVLADLPVAKGLGSATSASIVKIVGRR
SRRQLAERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDDRIQKIQIIKMME
GIFICAAPHCLKSFLKKSEFESHIHESHANLLQPNMKGETSEPEGSGTKQSSTLDTTLRG
PPRSGLPPSSTHQLNDREDKNWRQHPRDQPPVRPSMQSKPPPFYGQSHPSDPQSDNHPMG
LDGSSQTRMQQQIDSQGGMQQDFGQFSDKQIGNLPDPHREYPPPMFPQPPPNFQMPGNAN
PMMMGPPPFGFPPFPSDGAPPFYGAQVPYEIARSDSNGKGGSDQGSMGFAPGPGGPVNFS
DGYPRPWNGGPPNVPFEAVQGGQGLMGAPQGMPPPPPPPGPPPPHLVQQKHGYFPGDTSN
DGKSYGWQSDRRDSFGSSQD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaattcgacttaataaaggtgcttctttggataatgggaccggagttaaattg
tctccgggggagattgtaactgtagcatgtcctgatcatcttgttcttgctgatcttcct
gttgcaaagggtcttggttctgcaacttctgcttctattgttaagattgttggtcgtaga
tcacgtcgacagcttgctgagcgggttcatttttgtgttcgttgtgattttcctattgca
atttacggtcgcctgagtccatgtgagcatgcgttctgtcttgattgtgctaggagtgat
tctatctgctatctttgtgatgaccgtatccagaagatacaaataatcaaaatgatggag
ggaatcttcatttgtgctgctcctcactgcctcaaatcctttttgaagaaatctgaattt
gagtctcacatacatgaaagtcatgccaacttgcttcagccgaacatgaagggagaaacg
agtgaacctgaaggatcaggcactaagcagtcttcaactttagatacaacacttcgaggt
ccaccaaggtcaggtttacctcccagttcaactcatcagctaaatgatcgtgaggataaa
aattggcgccagcatcctagagaccagcctccagtaagaccatcaatgcagtcaaagcca
ccaccgttttacgggcaatcccatccgtctgacccacaatcggacaaccatccaatgggc
cttgatgggtcaagccaaactcgaatgcagcagcaaattgatagccagggtggaatgcag
caggacttcggacagttttcagacaaacagataggaaatctgcctgatcctcatcgtgag
tacccaccaccaatgtttccccagccgccacctaatttccagatgcctggtaatgcgaac
cctatgatgatgggcccacctccatttggcttccctcctttcccatctgatggagcccca
cctttttatggcgcacaagttccctatgagatagcacgatcagactcaaacgggaaaggt
ggatctgatcaagggtcaatgggttttgctccgggacctggtggacctgtcaatttctct
gatggttatcctcgtccttggaacgggggacccccaaatgttccttttgaagctgtccaa
ggtgggcaaggtttgatgggagcaccacaaggtatgccgcctcccccacctcctccgggg
ccaccacctcctcacttggtgcaacagaaacatggctactttccaggtgacacaagtaac
gatggaaagagctacggatggcaatcagacagacgcgatagctttggaagtagccaagac
tag
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