Amaranthus tricolor (tampala): 130798246
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Entry
130798246 CDS
T09367
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
atri03110
]
130798246
Chaperones and folding catalysts [BR:
atri03110
]
Heat shock proteins
HSP100
130798246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
bpMoxR
AAA_18
ATPase_2
nSTAND3
AAA_14
AAA_7
IstB_IS21
AAA_28
TniB
NACHT
TsaE
RNA_helicase
DUF815
Mg_chelatase
AAA_25
Zeta_toxin
T2SSE
ABC_tran
NBD_SMAX1
DNA_pol3_delta2
ResIII
AAA_19
DUF87
TMF_TATA_bd
DUF2987
Motif
Other DBs
NCBI-GeneID:
130798246
NCBI-ProteinID:
XP_057517141
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All DBs
Position
13:5158712..5162833
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AA seq
908 aa
AA seq
DB search
MNPDKFTHKTNEALVAAHELAMNNGHVQITPLHVATTLIGEPGGIFRQAISHAGGNEAAD
SVERVFKRAIKNLPSQSPPPDEIPGSTTLIKAIRRAQSLQKSRGDTHLAVDHFILGIIED
SQISDLLKEAGVAVARVKSEVEKLRGKDGKKVESATGDTNFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIMSGDVPSNLAEVRVIA
LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEG
HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEIELHALEKEKDKASKARLVEVKRELDDLRDKLQPLKMKYGKEKERIDELRHLKQRR
EELILAAQEAERRYDLARAADLRYGGIQEVEAAIARLESSSNEVAMLTETVGPEHIAEVV
SRWTGIPVTRLGENEKEKLIGLGERLHQRVVGQDNAVAAVAEAVLRSRAGLGRPQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHAAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GAEHLLSGLVGKSTMEAAREKVMEQVRRHFKPELLNRLDEIVVFDPLSHEQLRAVARLQM
KDVAKRLAERGIALAVTDAALDFVLAESYDPVYGARPIRRWLEKKVVTELSKMLIGEVID
ENSTVYIDAGMDGLAYRVEKNGGMVNAATGQRAEVLIQVPNGTRSDATQAAKKIRIEEID
DDDDEMMD
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgacaagtttacccacaagacaaatgaggctctagttgctgctcatgaattg
gcaatgaataatgggcatgtacagataacacctcttcatgttgccaccactttgatcggt
gagcctggtggtattttccgccaggctatttctcatgctggtggtaacgaggctgcagat
tcggtggaaagggtttttaaaagagctatcaaaaatcttccttctcaaagccctcctcct
gatgagattccaggaagtactacactcattaaagccattcgtcgtgcccaatcactccaa
aaatctcgcggtgatacccatttggctgttgatcatttcattttgggaattattgaagat
tcccaaatcagtgatttacttaaagaagctggggttgcggtggcgagagttaaatctgag
gtggagaaacttcgtgggaaggatgggaagaaagtagagagtgcaaccggagataccaat
ttccaagcccttaagacttatggtcgtgatttagttgagcaagcagggaaacttgaccct
gttattggtcgtgatgaggagattcgaagggttgtaagaatcctttcgaggagaacaaag
aataatcctgtactgattggtgagccgggtgttggtaaaactgctgtcgttgaagggttg
gctcaaaggataatgagcggtgatgtcccgagcaatcttgctgaagttagggtcattgca
ttggatatgggtgctctggttgcgggagccaaatataggggtgaatttgaggagaggttg
aaagctgtcttgaaagaagtggaagaagctgaaggcaaagtcattttgttcattgatgaa
attcacctcgtcctaggtgcaggacgaacagaaggctctatggatgcagctaatttgttc
aagccaatgcttgctaggggtcagcttcgttgcatcggtgctacgacactcgaggagtat
aggaagtatgtggaaaaggatgctgcttttgagcgtcgattccagcaagtgtatgttgct
gagcctagtgttcccgacacaattagcatccttcgagggttgaaggagaagtatgaaggt
caccatggtgttaggatccaagacagagccctggtggttgcagcacagttatctgctaga
tacataactggccgtcatcttcctgataaggccattgatttggttgatgaggcgtgtgca
aatgtcagggtccagcttgacagccagcctgaggagatagataatttggagaggaagaga
atgcagttggagattgagctacatgctcttgaaaaggaaaaagataaggctagtaaggca
cgacttgttgaggttaaaagggaattagatgacttgagggataagcttcagcctttgaaa
atgaaatatgggaaagagaaggaaagaattgatgagctccgtcatcttaagcaaagaagg
gaagaactcattcttgccgcacaggaagctgaaagaagatatgatcttgcaagagctgca
gatttgagatatggaggaattcaagaagtagaggcagccatcgcaaggcttgaatctagt
tctaacgaggtggccatgttgactgaaactgttgggccagagcacattgctgaggtggtg
agccggtggactggtataccagtcacaaggctgggtgagaatgagaaagagaagctaatt
gggttgggtgagaggttgcatcaacgagtggtaggtcaagacaatgcagttgctgccgtt
gcagaggctgtgttaagatcaagagccggtttagggagacctcagcagccaactggttca
ttcttgttcttgggtccaacaggtgttggaaaaactgaacttgccaaagctctggctgaa
cagctttttgatgatgagaatctgctggtgagaattgatatgtcggagtatatggagcaa
cattccgttgcaagattgattggtgctcctcccgggtatgttggccacgaggaaggtggg
caactcacagaggctgtcagaaggcgcccgtatagtgttgttttatttgatgaagtagag
aaggcccatgctgccgtcttcaacactctcttacaggttcttgatgatggaaggttgacg
gatggccaaggtaggactgtcgacttcaggaatacagtgatcattatgacatctaatctt
ggggcggagcatcttctttctggacttgtgggcaagagcacaatggaggctgctcgagaa
aaagtaatggaacaggtaaggagacacttcaagcctgaactgcttaatcgtttggatgag
atcgtagtcttcgatcctttatcacatgagcagctaagggcggttgctagactgcaaatg
aaggatgtggcaaaacgtctagcggaacgaggcattgcactggccgtcacagatgctgct
ctcgactttgtcctagctgaaagttatgatccagtgtatggtgcaaggcctataaggaga
tggttggaaaagaaagtggtaacagaattatctaaaatgctaattggtgaggtaatcgac
gagaactctactgtgtacatcgatgctggaatggatgggttggcctaccgcgtggagaaa
aatggcggaatggtgaatgctgcaacgggacaaagggcggaggtgctaattcaagtccct
aatggaacaaggagtgatgcgacacaagctgcgaagaagataagaattgaggagatagat
gatgatgatgatgagatgatggattga
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