Amaranthus tricolor (tampala): 130798524
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Entry
130798524 CDS
T09367
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130798524
03036 Chromosome and associated proteins [BR:
atri03036
]
130798524
Transcription factors [BR:
atri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130798524
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130798524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
130798524
NCBI-ProteinID:
XP_057517531
LinkDB
All DBs
Position
13:complement(1878068..1886532)
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AA seq
640 aa
AA seq
DB search
MADGHLFNNISLGGRGGTKQGQMRVHSGAVLWKKLGGGKAVEVDKSNISGLFWMKVQRSN
QLGVQSRDGLYYKFTGFRDQDVATLTSFFKSSYGINPEEKHVSVSGHNWGEVDFNGNMLA
FMVGSKQAFELSLADVSQTQMQGKNDVLLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPSAQVFHDKIMSMADVDAEEAVVTFDGIAILTPRGRYSIELHLSFLRLQGQANDF
KIQYSSVVRLFCLPKSNQPHTFVVITLDPPIRKGQTLYPHIVMQFETDYVVESTLSISEE
LLNTKYKDKLEPSYKGLIHDVFTNILRALSSAKVTRPGKFRSCQDGYAVKSSLKAEDGIL
YPLEKSFFFLPKPPTLILHEEIDYLEFQRHVVAGSNMHYFDLLVKLKTDQEHLFRNIQRN
EYHNLFDFISSKGLKIMNLGDGAGQPTSTIAALSSDDDDVDPHLNRIRDAQDESDEEDED
FVADRDDGGSPTDDSEEDQSDASASGEEGEIQKPAKKEKKDLTTSKASSSKKKSKDGDEE
GSKKRRQKKKKDPNAPKKAMSGFMFFSQAERENTKKENPGIMFTDIAKALGEKWRNMSAE
EKEPYEAKARADKKRYNDQIGGYKNSQSANVDSENESDSH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtcacctctttaacaacatctctcttggcggtcgtggcggcacaaagcaa
gggcagatgagagttcattcaggtgctgttctgtggaaaaagctgggcgggggaaaagct
gttgaagtcgataagagtaatatctctggattattctggatgaaggtgcagaggtcaaat
caacttggagttcaaagcagagatgggttgtattataagtttacaggtttccgggatcag
gatgttgccaccttgaccagctttttcaaaagcagctatggaattaaccccgaagagaaa
catgtttctgttagtgggcataattggggagaagttgattttaatggtaatatgctggct
ttcatggttggctcaaagcaagcctttgaactttctcttgctgatgtttcacaaactcag
atgcaaggaaaaaatgacgttctattagagttccatgtggatgataccactggtgctaac
gagaaagattcgcttatggagatcagttttcacataccaaattctaacacccagtttgtt
ggtgatgaaaatcgcccttctgctcaagttttccacgacaagatcatgtctatggctgat
gttgatgcagaagaggctgttgtcacatttgatggtattgctatccttactcctaggggt
cggtatagtatcgaactccatctttcgttcttacgtcttcaaggacaagctaatgatttt
aaaatccagtacagcagtgttgttcgtcttttctgtcttcccaagtcaaaccaaccacat
acatttgttgttatcactttagaccctccaattcgtaaagggcaaacactttatccacac
atcgtcatgcagtttgagactgattatgtggttgagagcactctttccattagtgaggaa
ctcttaaataccaagtacaaggataagttggaaccttcttacaagggtctcattcatgat
gtattcacaaacatattgcgtgccctatctagtgccaaagtcactagacccggaaaattc
cgtagctgccaagatggatatgctgtcaagtcatcactcaaagcagaagatggaattttg
tacccgcttgaaaagagctttttctttttacccaagcccccaactcttattcttcatgag
gagattgattatctggagttccaaaggcacgttgttgcaggatcaaatatgcattatttt
gacctccttgtaaaattgaagacagatcaagaacatctctttcggaatatccagaggaac
gaataccacaacttgtttgacttcatcagctctaagggcttgaaaatcatgaatttgggt
gatggtgctggtcaacctacgagcaccattgcagctcttagcagtgatgatgatgatgtc
gatcctcatttgaatagaatcagggatgcacaagatgagagtgatgaagaggatgaagat
tttgttgcagaccgggatgacggagggtctcctactgatgattctgaagaagatcaatct
gatgctagtgctagtggtgaggagggagagattcagaagcctgcgaagaaggaaaagaaa
gacttgacaacatcaaaagcctcctcaagcaagaagaaatctaaagatggagatgaagaa
ggatcgaagaagagaagacagaagaagaaaaaggatccaaatgcaccaaagaaggcgatg
tctggttttatgttcttctcgcaagctgaacgcgagaacacaaagaaagaaaatccaggt
ataatgttcacagatatcgcgaaagctcttggggagaaatggagaaacatgtcagctgag
gaaaaagaaccttacgaagcaaaagcacgcgctgacaagaagcgttacaacgatcaaatc
ggtggctacaagaattcacaatctgcaaacgtagattcagagaatgaatctgacagtcat
tag
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