Amaranthus tricolor (tampala): 130798601
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Entry
130798601 CDS
T09367
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130798601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130798601
Spliceosome [BR:
atri03041
]
Complex C
Other components
Step II factors
130798601
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Ribosomal_S3_C
Motif
Other DBs
NCBI-GeneID:
130798601
NCBI-ProteinID:
XP_057517641
LinkDB
All DBs
Position
13:complement(2799633..2806639)
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AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGNEINPHIPQYMSSAPWYLNSDKP
SLKHQRKWKSDPNYTKSWYNRGEKGFQADKYRKGSCANCGAITHDAKSCMERPRKVGAKW
TGKHIAPDEIIEEFELDFDGKRDRWNGFDPASYAYVVHRYEAKEEARRKYLKEQQLKKLE
EKNKTGEEGGASDEEEDDDEDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLR
IREDTAKYLLNLDVDSAYYDPKTRSMREDPLPDADPNEKFYAGDNQNRLSGQALEFKQLH
LHAWEAFDKGQDVHMQAAPSQAELLYKNFKINKEKLKSHVKDTIMEKYGNAASEGEIPRE
LLLGQTEGQVEYDRAGRIIKGQETALPKSKYEEDLYTNNHTSVWGSWWNDFQWGYICCKQ
TIRNSYCTGAAGIEAAEASGELMKANIARKEAMEEKPAPTEEKRLASWGTEVPEDLVLDE
KKLAEALKKETAKRKEEKDERKRKYNVKYDNDVTQEEMEAYRMKKIHHDDPMKDFL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcagttgcgtttaagtcaagggaagatcataggaagcagctggaatta
gaggaagcgcgaaaagcggggcttgcaccagcggaagttgacgaagatggaaacgaaatt
aatccacatataccacagtatatgtcttctgctccttggtatcttaattcagataaacct
agtttgaaacatcaaaggaagtggaaatcggatcctaattacaccaagtcgtggtataat
cgaggtgaaaagggttttcaggctgataagtatcgtaaaggttcttgcgcaaattgtgga
gccataacacatgatgcaaagtcatgcatggaaagacctcgaaaagttggagctaaatgg
acagggaaacacattgcaccagatgaaataattgaggaatttgagctagattttgatggg
aaacgtgacaggtggaatggttttgatcctgcaagttatgcatatgttgttcacagatat
gaggcaaaagaggaagcacgaagaaaatatctgaaggaacaacagttgaaaaagcttgag
gagaagaataaaactggtgaggagggcggggctagtgatgaagaagaagatgatgatgag
gatgctttaaaagttgatgaggccaaggttgatgaaagtaagcaaatggattttgcgaag
gttgaaaaacgtgttcgtacaactggtggaggaagtactggaactgtaagaaacttgcgt
atacgagaggatacagccaagtatcttttgaaccttgatgttgattcggcctactatgat
cccaaaacgcggtccatgcgtgaagatcctctcccagatgctgatccaaacgagaagttt
tatgctggtgataatcaaaacaggcttagtggtcaagctttagagtttaaacagctgcat
ttgcatgcttgggaggcatttgacaagggacaagatgtgcacatgcaagcagctccatcc
caagctgagttgttatacaagaactttaagatcaataaagagaagttgaagtcccacgtg
aaggacaccatcatggagaagtatggcaatgctgcatcagaaggggaaattccacgtgaa
cttcttctaggtcaaactgaaggacaagttgaatatgaccgtgctggtcgaataatcaaa
ggacaggagactgcacttcccaagagtaaatacgaagaagatttgtacaccaataatcac
acaagtgtctgggggtcttggtggaatgatttccaatggggctacatttgctgcaagcag
actattcgaaacagctactgtacaggtgctgctggaattgaggctgcagaagcatcaggg
gaactgatgaaagcgaacattgctcgcaaagaagccatggaagaaaaaccagctcctact
gaggagaaacggctcgcatcttggggtacagaggtaccagaggacttggtgctggatgag
aagaaactcgctgaagctcttaagaaggagacggcaaagagaaaagaagagaaggatgaa
aggaaacgaaaatacaatgtaaagtatgataacgatgtgacgcaagaagagatggaagca
tatagaatgaaaaaaattcaccatgatgatccaatgaaggatttcttgtag
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