Amaranthus tricolor (tampala): 130798728
Help
Entry
130798728 CDS
T09367
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Module
atri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130798728
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
130798728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130798728
NCBI-ProteinID:
XP_057517814
LinkDB
All DBs
Position
13:complement(3415303..3417126)
Genome browser
AA seq
404 aa
AA seq
DB search
MPNFYSLLFVIFANTFCQGYSRNLPTAINGITINVRSFRVRADGRTDDTQAFNAAWERAC
NSQGNVTFLIPKGIYLVGPLRFRGPCQKVSSLTILIKGYMKAKPELSEYEFGSGWVEFAW
INGLILKGGGVFDGQGAKSWPYNNCPTNSNCDLLPTNLKFVGMNRTVIDQITSLNSKFFH
IALVECRDFNGSRLYISAPENSPNTDGIHIERSSIVRLSSSNIGSGDDCISIGQGNSQIT
VTNITCGPGHGISVGSLGKYPNEQDINGLFVKNCTMNGTTNGIRIKTWADSPGASMATNM
NFENIVMKHVRNPIIIDQAYCPFDSCSSEVASRVKLSNIYFKDIRGTTPSEVAVTLSCSK
KIPCKNIFLQNVHLNLTSGERLPISTCENVKARYIGIQMPPPCS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacttctattctctactctttgtaatctttgctaacacattctgtcaaggatac
tcaagaaatttaccaacagccattaatggtatcaccattaatgtaaggagttttcgggtt
cgggctgatggtagaacagatgatacccaagctttcaatgcagcttgggaaagagcttgt
aactctcaaggcaatgttacttttctgatacctaaaggaatttaccttgtgggccctctt
aggtttagaggtccttgtcaaaaagtatcatctcttacaattcttatcaagggttatatg
aaggcgaaaccggagctatccgaatacgaatttggatccgggtgggttgagtttgcatgg
attaatgggctgatcttgaaaggtggtggggtttttgatgggcaaggtgccaaatcttgg
ccttacaataactgccctacaaattctaattgtgatctcctacctactaatttgaagttt
gtggggatgaacagaacagttattgatcaaattacttcattaaacagcaagttttttcat
atagctcttgtagagtgcagagatttcaatggcagtagactttatatttcagcaccggaa
aacagtcctaacacggatggaatccacatcgaacgaagctctatcgttcgtttatctagt
tcaaacatcggctctggggatgattgtatctctataggccaaggaaattcccaaataact
gtcacaaacatcacttgtggaccaggtcatggtataagtgttggaagcttgggaaaatac
ccaaatgagcaagatataaatggactttttgttaaaaactgcactatgaatggaactaca
aatgggattaggatcaaaacatgggctgattcacctggtgcaagtatggctactaacatg
aatttcgagaacattgtgatgaaacacgttcgaaacccaataattatcgatcaagcttat
tgtcctttcgactcttgttcatccgaggtggcatcaagggtgaaacttagcaacatctat
ttcaaggatatcagggggactacaccatctgaagttgcagttacactttcttgcagtaag
aagattccatgcaagaacatttttctacaaaatgttcatttgaatttgacatccggtgaa
aggctaccaatttcaacgtgcgaaaatgtaaaagctagatacattggtattcagatgcct
cctccatgttcatga
DBGET
integrated database retrieval system
