KEGG   Amaranthus tricolor (tampala): 130799434
Entry
130799434         CDS       T09367                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03020  RNA polymerase
atri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130799434
  09124 Replication and repair
   03420 Nucleotide excision repair
    130799434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atri03021]
    130799434
   03400 DNA repair and recombination proteins [BR:atri03400]
    130799434
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130799434
  RNA polymerase III system
   RNA polymerase III
     130799434
  RNA polymerase I system
   RNA polymerase I
     130799434
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130799434
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 130799434
NCBI-ProteinID: XP_057518508
LinkDB
Position
1:3601660..3605032
AA seq 206 aa
MATSEEEITKLYRIQRTIMQMLNDRGYIVADHELNLSKQRFIDKYGEHMKRDALSIQKTR
RNDSSDQIYVFFPEEPKVGVKTIKSYTNMMKNENVSRAILVVQQNLTPFAKTCINEISSK
FHLEVFQEPELLVNIKEHVLVPEHQLLTDEEKKTLLQRYTVKETQLPRIQMNDPVARYYG
LKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggctacctcagaagaggaaataaccaaactatacagaatccagaggacaataatgcaa
atgttgaatgacagaggttacattgtggctgaccatgagctcaatttgtcgaagcagcga
tttatagataaatatggtgagcatatgaagagggatgccctttctatccaaaagaccaga
cggaatgatagctctgatcagatatatgttttcttccccgaagagccgaaggttggtgtt
aaaacaatcaagagttacaccaacatgatgaaaaatgaaaatgtttcaagagcaattttg
gtggttcagcagaacttgactccttttgccaaaacttgtataaatgaaatctcctcaaaa
tttcacctggaggtttttcaggagccagagctcttggttaacatcaaggaacatgttctt
gttcctgaacatcaattactaactgatgaagaaaagaagaccctgctccaaaggtatacc
gtcaaggaaacccagctaccaagaattcaaatgaatgatccggttgcaaggtattatgga
cttaagcgtggacaagttgtgaagatcatacggcctagtgaaacagctggtagatacgtc
acttatcgatatgttgtgtga

DBGET integrated database retrieval system