KEGG   Amaranthus tricolor (tampala): 130799567
Entry
130799567         CDS       T09367                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atri03036]
    130799567
   03400 DNA repair and recombination proteins [BR:atri03400]
    130799567
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    130799567
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130799567
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2 V-ATPase_H_N TPR_Trm732
Other DBs
NCBI-GeneID: 130799567
NCBI-ProteinID: XP_057518684
LinkDB
Position
1:3752988..3771888
AA seq 1134 aa
MEPKSFLVKQIESFVDSSASSSQQAANVSSIASLLKNGAITMEFLVREMEMYLTTTDHIL
RARGILLLAEVLEHLRSKPLDNASIHTLVGFFTERLADWRALRGALVGCLALVRRKFDAG
VVTEADAKLLAKSFLENLQVQSLGQLDRKMCFELLECLIERYPKSISLQGDHVVYGVCEA
IEGEKDPQCLMHVFCIVEGLAKIFPEPSGPLATFAEDLFDIIGCYFPIHYTHTKGEDVDV
NRDELSKALMLAFSASPFFEPFAIPLLLEKLSSNLPIAKIDSLRYLSYCIVKYGPERLAK
HAGAIWSSLKAALCDFQTDVSTLASDLSNSMGFQESEITKEALVLLQQVASQQSNSFVNL
VLEDKDINGLLNYISVSGSYKSVPPLNEQNLRSVGRVFSVLAKASTTSCNSVFDTLFLRL
LDNLGASVSTSKDMLAVDSNLSYQGLNFCAGYICVEILGACRELAVTSVRETANYNFVED
AWCQTLARYSYSLMKAFISNLESSTAKMYHDEDVSLRVKGLQILATFPGHSVPVSTTTFD
TIMGIFVSIVNNNFNMPTLWNVSLNALAETGTFLYEYPYSEKLLSYTSTVVERLISLISS
DDSAIPFSLLLEALSKIGATGHTVLLKIVQGMQDTISVKFAKFYLDGDVKVCADLVQLLD
CYSIKLLPWFHTVEGSESLLLRFAIDIWDQIEAATASSFIVEGKPLLDATRLALKLAVAM
LLEEGQLQITEKAFDVISSNLSFVPNSKLGELKISGDPDGFLCRDEWLTSLFASVVIALR
PKTLIGNFRAVIELLLTSFIKGQVASAQALGSIINKMPLKNDDMHDFSYLDLDAALSLIL
ESILGRYSKRILSSSSEIDSGELCPNVSIGLPLQGKSISGLAWIGKGLLMRGHEKLKDIT
MIFFSFLVSNTESEALTGDKSLSAEGEIPPLMANYAADAFNILMSDSEDCLNKTFHAIIR
PLYKQRFFSTVMPILLSAVKKTQSHSMRSMLYRAIGHVISNTPVAAILIETKKVLPVLLD
AISALSEDSLDKDMIYNLLLVISGLLMDKNGQDVTVENAHVIINCLTGLLSYSHKMLVRE
TAVQCLVAVSGLPHARIYPMRAQVLRALSKVLDDPKRTVRQEAVRCRHAWASIA
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggaacccaaatctttcttagtgaagcaaatcgaatcctttgttgattcttcagcgtct
tcttctcagcaggcggctaatgttagttctattgcgtctctcttgaagaatggcgcaatt
acaatggaatttttggtgagggaaatggagatgtatcttaccaccaccgaccatattctt
cgtgcaagaggtattcttctccttgcagaagtacttgagcatctacggtcaaagccactt
gataatgcttcaatccacaccttagtagggttcttcactgagagactggcagattggaga
gctttacgtggtgcacttgttggttgtttggcccttgtgagaagaaaatttgatgcagga
gtggtaactgaagctgatgctaaattattggccaagtcttttttggagaacttacaggtg
caatcactaggccagctagatagaaagatgtgctttgaacttctggaatgccttatagag
cgttacccaaaatcaatatctttacagggtgatcacgttgtttatggtgtctgtgaagct
atcgaaggagaaaaagatcctcagtgtttaatgcatgtgttctgcatcgtggagggtttg
gcaaaaatatttcctgaaccttctggacctttagcaacttttgctgaggatctctttgac
ataataggttgttattttcctatccactacacacatacgaagggtgaagatgttgatgtc
aacagagatgaactctcaaaggctttgatgctggcattttctgcatcgcccttttttgag
ccgtttgccattcccttgcttttggagaaactttcgtccaatctgccaatagcgaagatt
gattcactgaggtatctaagctactgcattgtgaagtatgggcctgaaagactagcaaag
catgcaggagctatatggagctctttgaaagctgcactttgtgattttcaaacagatgtt
tcaaccctggcttcagatttatcaaatagtatgggtttccaagagagtgaaattacaaaa
gaagctttagtacttcttcaacaggttgcctcacaacagagcaatagctttgtgaactta
gttcttgaagataaggacataaatggccttttaaactatatttctgtttctggaagttat
aaatctgttccgcctttgaatgagcagaatcttcgttcagttggtcgtgttttctctgtt
ttagcaaaagcgtcaacaacttcttgtaattcagtgtttgatactcttttcctccgtcta
ttggacaatcttggagcttctgtcagtacttcaaaggatatgctagctgtagattctaat
ttatcgtaccagggattgaatttctgtgctggttatatatgcgttgaaatccttggtgca
tgtcgagaattagctgttacttctgttcgagagactgcgaattataactttgttgaagat
gcatggtgccagacacttgcgagatattcttattcattgatgaaggcattcatctcaaat
ttggaatcaagcactgctaagatgtatcatgatgaggatgtttctctacgagtgaagggt
cttcagattctggctacatttcctggacattccgttcctgtgtcaacaacaacttttgat
actattatgggtatatttgtatcaatcgtcaataataattttaacatgcccactctatgg
aatgtatcactgaatgcactagcggaaactggtacatttctgtacgaatatccatactct
gagaagttgctaagctacacatctactgttgttgagaggctgatttctctaatctcgtct
gacgattcagctattcctttctctttgcttttagaagcactttctaaaattggtgctact
gggcacacagtgttgttgaaaattgttcaagggatgcaagacacgatttcagtcaagttt
gcaaagttctatcttgatggagatgtgaaagtgtgtgcagacctggtgcagcttctagat
tgctactctataaagttacttccatggtttcacacagttgagggctctgagagtttgctt
ttgaggtttgccattgatatatgggatcaaattgaagcagccacagcaagcagttttatt
gttgagggaaagcctcttctagatgcaacgagattggctctaaaactggctgttgctatg
ctgttggaggaaggtcagctgcagatcactgagaaagcttttgatgtgatttcatcaaat
ttgtcttttgtacccaattccaagctaggagagttgaaaatatcaggagatccagatggt
tttttgtgcagagatgagtggcttacatcactgtttgcatctgtcgttattgcacttcgt
cctaaaacgcttattggtaactttagagctgttatagagttactgttgacatctttcata
aagggtcaagtggcatcggctcaagcattgggttcaatcatcaataagatgccgttgaag
aatgatgacatgcacgattttagctaccttgacctggatgctgctttgtcattgatttta
gaaagtattttaggacgttacagtaagcgtatactttcaagtagttctgagattgattct
ggtgagctttgtccaaatgtgtctattggtcttccgcttcaaggcaaatctatctctggg
cttgcatggatagggaaaggactgctaatgaggggacatgaaaagttaaaagatataact
atgattttcttcagttttctagtctcaaacactgaatcagaagccttaactggcgataaa
agtttgtcagcagaaggggagataccaccattgatggcaaattatgcagcagatgcattt
aacattcttatgagtgattctgaggattgtttgaataaaacatttcatgcaattataaga
cctctttacaaacagcggtttttctctactgtaatgccaattttgctgtctgcagtgaag
aagacccagtcccattcaatgagatctatgctttaccgagcaatcggacatgttatttca
aacacaccagtagcagctatcctgatagaaactaagaaggttcttcctgtactcttggat
gctatctctgcccttagtgaggacagtcttgacaaagatatgatctacaatctcttgctg
gtcatttctggtcttctaatggataaaaatggacaagacgttaccgtggagaatgctcat
gtcataataaactgcttgactggactgctctcttactcccataagatgctcgtacgagaa
acagcagtgcaatgtcttgttgctgtgtcagggttgccccatgcaagaatctatccaatg
cgagcacaggtactcagagctttgtctaaggttttagatgatccaaagaggactgttcgt
caagaagctgtcagatgccggcatgcatgggcttcaattgcatga

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