Amaranthus tricolor (tampala): 130799608
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Entry
130799608 CDS
T09367
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130799608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130799608
03036 Chromosome and associated proteins [BR:
atri03036
]
130799608
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130799608
Coactivators
SAGA/TFTC/STAGA complex
130799608
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130799608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
130799608
NCBI-ProteinID:
XP_057518735
LinkDB
All DBs
Position
14:complement(2120733..2130221)
Genome browser
AA seq
927 aa
AA seq
DB search
MDPSIMKLLEEDEDESMHSGADVEAFTAALNRDIEGDASASHPSHSNILEIIAAFSQDNN
QTSSQAYSQWQPSGQEENSSNQSQQQGLSSQEQQQSSDLEMKEHGFSMEIQQEVNGSEEP
SGPSSHSHRPVQSDGQGLPAEPNSGEFSQTSMPMQTQISGLHHTQAHEPNRVHNPSSESQ
LLNMQRYANQPVPAPGQGGTSVNRGKQIPFGTMLPLILPELDKDKAMQLQTLYGKLRRNE
VPKDAFVRLMRGIIGDNMLRLAVLKMQAKVQPQNSSRQPHQRPPTGTAAQFSDPYSFGQL
QQKSHGTPTMTQIPSSVSQPFNDSSLQMADNNSLNSREMGSLTDSHGVQTNQMSDRATIS
LHGLTKQQQQHLHFTQGSFPMYGASNYHSFTGTSASTPSLAKPQRFDPQARQGQLHQGFS
SAHGDGSSQAINVTNTPKVNDTQRISGVPMNNMPTPSIQHTSVLWQVNKEQKIGASPNMS
YVKQEPSEQALDKRPKPQISSAQGPTFPGAVMDQGNSLVPPSNNEILEKHDSRISFPSSQ
RTVTAATSGSVPSHTDTDYQVGSQSISSGGIGKASAKKSISGQKKPLDALGSSPPLSSKK
QKVSGAFSDQSIEHLNDVTAVSGVNLREEEEQLFSVPKDDSRVSEASRKAVQEEEDRLIL
QKVPLQKKLAEIMSKYGLKNLSNDVERCLSLCVEERMRGLISSLIRVSRQRVDSEKSRHN
TVVTSDVREQIMAINRKAREEWDKKQAEAEKLRKQNEDPDSSAIVDVDKEKDEGRAKSLK
IQQVNKEEDDKIRTTAANLAARAAFGGDDMLSKWQLMAQARQKREGGPEIASSSQSGKDT
TSKQVANTVGNAKEIQGTGKKDSSAALPASGGARQSGRSQVVVPPPRIAPRISVKDVISV
LEREPQMAKSTMIYKLYNKLHADPAAD
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctataatgaagcttcttgaagaggacgaggatgaatccatgcattctgga
gctgatgttgaggcttttactgctgccttaaacagagatatagaaggtgatgcatcagct
tctcacccttctcactcaaatattttagaaatcattgcagcattctctcaagacaacaat
caaacttctagtcaggcatattcacaatggcagccttctggacaagaggaaaatagtagc
aaccagtcgcaacagcaaggtttaagtagtcaagagcagcagcaatcatctgatctggag
atgaaagagcatgggtttagcatggagattcagcaagaagttaatggctctgaggagcct
agtggcccttcttcacactctcataggcctgtgcaaagtgatggtcagggactcccagca
gaacctaattctggagagttttcccaaacttctatgccgatgcaaacacagatttctgga
ttacatcacactcaggctcacgaaccaaacagagtacataatccaagcagcgaatctcag
ttattgaacatgcaaagatatgctaatcaaccagttccagcgccagggcagggtggtaca
tcagttaatcgagggaagcaaataccttttggcactatgcttcctcttattcttcctgaa
ttagataaggacaaagctatgcaactccaaactttgtacggaaaattacggagaaatgag
gtacccaaagatgcatttgtcaggctcatgagaggcattataggggacaacatgctgagg
ttggctgtgctcaagatgcaagctaaggtgcagccacagaactctagtcggcagccacac
cagagacctccgactggtactgcagcacaattctctgatccttattcatttggacagcta
caacagaagagtcatggaactcctaccatgacacagatccctagctctgtatcgcagcca
tttaatgattcaagcctccaaatggctgacaacaattctcttaattcaagagagatggga
tcactgacggattctcatggagtgcaaacaaaccagatgtctgatcgagcaacaatatca
ttgcatggacttacaaagcaacaacagcagcatttgcattttactcagggttccttccca
atgtatggagccagtaactatcactccttcactggaacaagtgctagtacaccgtcattg
gctaaacctcaacggtttgatccccaagctaggcaaggtcaactacatcaaggatttagt
tctgctcatggagatggttcaagccaggccataaatgtgacaaatactcccaaagttaac
gatacccaaagaatttctggtgtacccatgaacaacatgcccactccttcgatccaacat
acttctgttctgtggcaggtaaataaagagcagaaaattggtgcttcaccaaacatgagc
tatgtgaagcaggagccttctgagcaggctcttgacaaacgaccaaagcctcaaatctct
tcagcacagggtcctacctttcctggcgctgtaatggatcaaggaaattcacttgtacct
ccttccaacaatgaaattttggagaaacatgattctagaatatcctttccatcttcgcag
aggactgtaactgcggcaacttcgggttcagttccttcccatacggatactgattaccag
gtaggttctcagagtatctcatcgggtgggattgggaaggcgtcggctaaaaagtcgatt
agtggtcaaaagaagccacttgatgcacttggttcttcaccacccctttctagtaaaaag
cagaaggtttctggtgccttttctgatcaaagtattgaacatctcaatgatgttactgcc
gttagtggggttaatcttagagaagaggaggaacaattattttctgttcccaaggatgat
agcagagtatcagaagcatcacgtaaggctgttcaagaagaagaagatagactgattctg
cagaaggttcctcttcagaagaaattggcagaaataatgtcaaagtacgggttgaagaac
ttgagcaatgatgtggagcggtgcctctcattatgtgtagaggaaagaatgcgtggtttg
ataagcagtctgattagagtttcccgacagcgagttgattctgaaaagtctaggcacaat
actgttgttacttctgacgttcgagaacaaatcatggcaattaatcggaaagccagagaa
gaatgggataagaaacaagctgaagcagagaaactccgcaaacaaaatgaagatcctgac
agcagtgctatagttgatgttgacaaggagaaagatgaaggccgtgcaaagtcgcttaag
attcaacaagtgaacaaagaggaggatgacaaaatacgcacaacagcagcaaatttagca
gcccgagctgcttttggaggggatgacatgctatcaaaatggcagcttatggcacaagct
cgccaaaagcgtgaagggggacctgaaattgcatccagttctcagtccggtaaagataca
accagcaaacaagttgcaaacactgtcgggaacgcaaaggaaatccaaggaactggaaaa
aaggattcatcagctgctcttcctgcatctggaggagcaagacaaagtggcagaagtcaa
gttgtcgtgccgcctcccaggatagctcctcgtatctctgtaaaggatgtcatttctgtt
ctggaaagagaacctcagatggcaaagtccacaatgatttacaaactctacaacaaactg
catgccgatcctgctgctgattga
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