Amaranthus tricolor (tampala): 130799945
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Entry
130799945 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130799945 isoform X1
KO
K23288
syndetin
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130799945
Membrane trafficking [BR:
atri04131
]
Protein recycling
Others
EARP complex
130799945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Xre_MbcA_ParS-like_N
Motif
Other DBs
NCBI-GeneID:
130799945
NCBI-ProteinID:
XP_057519234
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Position
1:complement(12795456..12827891)
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AA seq
1139 aa
AA seq
DB search
MQPSSSSSSPFSLSPLPFLYSINGELSNTSIEGFDSSRVLFLASLWLFQGGSGPGGGSMD
LSKVGEKILSSVRSARSLGLLPSTSDRPEVPARAAAAAAVARALATLPPDQRESLSSSSE
ELSAIYGSRSNGPAVEELEEEFYKEDFDPVMYVLEHIPSDEDELEYYENKATVRLAQLEK
ISAHLSRHVMEHHEEMVRGMQLVRELERDLKVATVICMNGRRHLSSSMHEVSRDLIVTTS
SRKKQALLDMLPILTELCHAQIMRKELEILVEEGNFCKAFQVLSEYLQHLDTHSELSAVQ
EMGRNVEVWLGNTLQKLDSLLLQVCQVFKEEKYVTVVDAYALIGDVSGLAEKIQSFFMQE
VLSQTHSAVKSAAQEDQDTDGLQNSSRLTYSDLCLQIPESKFRQCLLRTLAVLFELMCSY
FSIMSFQPRNEMQEGLDSQYDNCQKAEVQSMNSGSGIHVDRVDDEPSAAVGERLERCSNG
EYASKSSSANTSGMNSSHHRNSSNFPDLPLDDSAMLNSGSPWYELRRDATALVSQSLQRG
CKNFWQLMTSRVSVLLSSAAFSSTSIHQFLKNYEDLNIYVLAGEAFCGVEASEFRKKLKA
ACETYFSNFHKQNIYALKMVLDRESWQKLPPDAIQVVSFAGLVGDGAPLIALSAVCSMDV
GLICSNISMHSTESGPKKSGFSRWLKTGNPFTMKVSSPASCHTSSPFVDGTSGSFDLDGP
SKKFDIEKQHPAENNRSHANGETSVLDDENEDLLADFIDEDSQLPSRISRPHLSHNHSLP
WRDDEDAAQTGSSICLLRFMDKYARLMQKIGIVNVELFKGLCELFEIYYYFVFETFGHQE
SFASGKGVAETLNNRLKTAVHRITQDCEQWLRPKQLTSSVSLPVSLNSSLKNMDLTPTIP
PGTNFGQSPGLKETCAAVDTVSLVARILHRSKPHLQSTLLQNNPAIVEDFFECLVDSVPD
LTEHIYRSTARSLLHINGYIDRIANAKWEVKELGMEHNGYVDLLLGEFKHYRTRLAHAGI
RKEVQELLLEYGVEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSKDVKPK
MHIVETFIKAYYLPETEYVFWARAHPEYSKSQVVGLVNLVATMKSWKRKTRVEIIEKIQ
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcagccatcatcatcttcatcttcgccattttcattaagtccattaccttttctctac
agtattaatggtgaattaagcaatacttccattgaaggtttcgatagttctagggttttg
tttttagcttctttgtggttatttcaaggtggtagtgggcctggtggtggttccatggat
ttatctaaggttggcgagaaaatcctaagctctgtgcgttctgctcgttctcttggtctt
cttccttctacttccgatcgtcctgaggttcctgctagggcagctgcagcagcagctgtt
gctcgagctcttgcaactttacctcctgatcagagggaaagtctctcatcaagttccgag
gagctgagtgccatttatggaagtaggtctaatggtccagcagtagaggagttagaagaa
gaattctacaaagaggattttgatccagttatgtatgttctggagcatattccatcagac
gaagatgagttggaatattatgaaaacaaggcaactgtaagactagcccagctggagaag
atatctgcacatttatctcgccatgtcatggagcatcatgaagaaatggttaggggtatg
caattggtaagagaactggagagggacttgaaggtcgccactgttatttgcatgaatggg
aggaggcatctttcgtcttctatgcatgaggtctctagggatctcattgtaacaacaagt
tcaagaaagaaacaagctctcttggatatgctcccgatattgactgaattatgtcatgcc
cagatcatgcgtaaagagcttgaaatacttgtcgaggaaggcaacttctgcaaggctttc
caagtactttccgaatatttgcaacatctagatactcactcagagctttcagctgtacaa
gaaatgggccgcaatgtcgaggtttggctgggcaatactcttcagaagctggattcctta
ttgttacaagtatgccaggttttcaaggaggagaaatatgtgacagtggttgatgcctat
gcattaattggggatgtttctggccttgctgaaaagatacagagctttttcatgcaggaa
gttctttcccagactcattctgcagtgaagtctgcagctcaagaggatcaggatacagac
ggtttacaaaatagttcgagacttacctacagcgacctatgtctccagataccagaatct
aaattcagacagtgtttgctgagaacattagctgtcctttttgagctgatgtgttcttat
ttttccataatgagcttccagccaaggaacgagatgcaagagggcttggacagccaatat
gataattgtcagaaagcagaagttcaatcaatgaattcaggttcgggaattcatgtagat
agagtagacgatgaaccttcagctgctgttggtgagaggttggaacgttgttccaatggt
gaatatgcgagtaaaagttcttctgctaatacctctggaatgaattcctcccatcatcgg
aattccagtaacttccctgatttgccactggatgatagtgccatgttgaacagtggatct
ccttggtatgaattgcgaagggatgctacagctcttgtatcccagtctcttcagagggga
tgtaaaaatttttggcaacttatgacaagtcgtgtttcagtattgctctcatcagctgca
tttagttcaacaagcattcaccaatttctcaaaaattatgaggatctaaatatatatgtt
ttggctggggaagcgttctgtggagttgaggcttccgagttcaggaaaaagttgaaggct
gcatgtgaaacttacttcagtaattttcacaagcagaatatatatgctttaaaaatggtt
ttggatagggaaagttggcagaaattgccacctgatgctattcaagttgtcagttttgct
ggccttgttggtgatggagcacctttaattgctctttcagctgtttgttcgatggatgtt
gggctgatttgctctaatatatcaatgcattctacggaatctggtcctaaaaagagtggg
ttttctcgctggcttaaaactggaaatcctttcacaatgaaggtttcatctcctgcaagc
tgtcacacatcttccccttttgttgatgggacatctggttctttcgatcttgatggaccc
tctaaaaaatttgacattgagaagcaacatcctgcagaaaataacaggagtcatgcaaat
ggtgagacttcagttcttgatgatgaaaatgaagatcttcttgctgacttcattgatgaa
gatagtcaactcccaagcaggatatctaggcctcatctttcacataaccactctttaccg
tggagagatgatgaagatgctgcacaaacaggatcttcaatttgtttgctgaggttcatg
gacaaatatgcaaggcttatgcagaagataggaattgtcaatgttgagctattcaaggga
ttgtgcgaattgtttgagatttattattactttgtgtttgaaacatttggtcatcaagaa
agttttgcaagtgggaaaggtgttgctgagactctcaataatcgtttgaagacagctgtt
cacagaataacacaagactgtgaacaatggttaagacctaagcagcttacctcttcagta
tcgttgcctgtctctcttaactcatcattgaagaatatggatcttacacccactattcct
cctggcacaaattttggtcaatctccaggactcaaggagacttgtgcagctgttgatact
gtatcacttgttgctcgcatattgcatagatctaagcctcatctccagtccacgcttttg
caaaataatccagcgatagttgaagatttttttgagtgtctggttgactctgtcccagac
cttacagagcacatttatagatcaactgcaagatcacttcttcacatcaatgggtacatt
gatcgaattgccaatgctaaatgggaagtcaaagagcttggaatggagcataatggttat
gttgatttacttttgggagaattcaaacactataggacaaggcttgctcatgctggaatt
cgcaaggaggttcaagaacttcttttggaatatggtgtcgaaattgttgcagaaacactt
gttgaaggtctatcacgtgtgaagaggtgctcggatgaaggcagagccctaatgtctttg
gatcttcaggtgttgattaatggactacaacattttgtgtctaaagatgtaaaaccaaaa
atgcacatagttgagacattcattaaggcctattaccttcctgaaaccgagtatgttttt
tgggcacgcgctcacccggagtacagcaaaagtcaagttgtagggttagtcaatcttgta
gcaactatgaaaagttggaagagaaaaaccagagtggaaatcattgagaaaatacagtga
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