Amaranthus tricolor (tampala): 130799960
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Entry
130799960 CDS
T09367
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130799960
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130799960
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130799960
04121 Ubiquitin system [BR:
atri04121
]
130799960
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130799960
Peptidases and inhibitors [BR:
atri01002
]
Metallo peptidases
Family M67
130799960
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Others
Others
130799960
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
130799960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
130799960
NCBI-ProteinID:
XP_057519248
LinkDB
All DBs
Position
14:5490077..5508322
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AA seq
514 aa
AA seq
DB search
MRPPSTRIDIAANTQKLDVDNRISLRIYYRIADSILRQAAIFRNERNIVDLYVMLLRFSS
LVSETIPSHREYAASPQSKRSFLKKQLLIALNELETLKPAVKQKLEQRERKPIYQAIGQN
CGILPNESSNSSVQHTLIKSQFPINNQLVQASQNFTSGVYGGSNALQKVHVVPMEERFNR
LSVTLPRPREETLLKHSIVGSNGLFRQWQPPVADKEVRYPSDIDITPVDIPRFQQSMAIE
DGIPSRKDGNAFDCEKPKLHSKLEPSSDNQMPPDDKQLMISFETSDVSDTVIIKQPSPPS
VLAEVLDLIPTEPTLVSEKHDAVDTPFKDSFLQPESPMELHISTSMMNTFLKLAKSNTSK
DLETCGILAGSLKNRKFYVTTLIIPKQESTSNTCQATNEEEIFEVQDKCSLFSLGWIHTH
PTQSCFMSSVDVHTHYSYQVMLPEAVAIVMAPTDRTRTHGIFRLTTPGGMSVIRHCERRG
FHSHEQPADGGPIYKHCTDVYMNPNLKFDVIDLR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccccttctactcgtattgacattgctgctaacactcagaaactggatgttgac
aatcgaatttctttgcgcatctactacaggatcgccgactctatactcagacaggctgct
atttttcggaatgagaggaatattgtagacctctatgttatgcttctgagattttcaagc
ttggtatctgagactatcccaagccatagagaatatgccgcatctccacagagcaaaaga
agttttttgaaaaagcaattgctaattgccttgaacgaattggagactctgaagccagct
gttaagcaaaagcttgaacaacgtgaaagaaaacccatataccaagctattggacagaac
tgtggtatccttcctaatgaatcatctaattcttcagtgcaacatactctcatcaaatca
caatttccaattaataatcaattagttcaggcatcacagaattttaccagtggtgtatat
ggaggatccaatgcgttgcagaaagttcatgttgttcccatggaagaaagatttaataga
ttgtctgttaccctacctcgtcccagagaggaaacacttttgaagcattcaattgtggga
tccaatggtctattcagacagtggcaaccgcctgtcgctgataaagaagttcgatacccc
agtgatattgatatcactcctgttgatatcccaaggttccaacagagcatggctattgaa
gatggaataccttctaggaaagatggtaacgcctttgactgtgaaaaaccaaaattgcac
tcaaaacttgagcctagtagtgataatcagatgccacctgatgacaagcagctaatgatt
tcatttgaaacatctgacgtctctgatactgttattatcaagcaacctagccctccatct
gtacttgcagaggtgctagacttaatccctactgagccaacccttgtatcggaaaaacat
gacgcagtggatactccgtttaaggatagttttcttcagccagaatctcctatggagctg
cacatatcaacaagtatgatgaatacattcttgaaactggccaaatctaacacatcgaaa
gatctggagacatgcggtattcttgctggttcccttaagaacagaaaattctatgttacg
actttaataattccaaagcaggaatcaacgtcaaatacttgccaggcaacaaatgaggag
gagatatttgaagtgcaggataaatgctcgcttttctcattgggatggattcatactcat
cccacccaatcctgtttcatgtcatctgttgacgttcacacccactactcatatcaggtt
atgttgcccgaagctgtagcgatcgtaatggcacccacagaccgaaccagaactcacggc
atcttccgattaacaacccccggaggaatgtcggttattagacattgtgagcggcgtgga
tttcattcacatgaacagcctgctgatggtgggcccatatataagcattgtacagatgta
tatatgaatcctaatttgaagtttgatgttatagatcttagatga
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