Amaranthus tricolor (tampala): 130800008
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Entry
130800008 CDS
T09367
Name
(RefSeq) AP-4 complex subunit epsilon-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130800008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130800008
Membrane trafficking [BR:
atri04131
]
Endosome - Golgi transport
Others
AP-4 complex
130800008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
INTS1_R4
HEAT
Cnd1
HEAT_2
HEAT_EZ
TOR1L1_N
NPHI_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
130800008
NCBI-ProteinID:
XP_057519315
LinkDB
All DBs
Position
14:6085912..6100354
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AA seq
962 aa
AA seq
DB search
MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSRSEEDRIVLHEIETLKRRIIEPD
IPKRKMKEFIIRLVYVEMLGHDASFGYIHAVKMTHDDNILLKRTGYLAVTLFLNDDHDLI
ILIVNTIQKDLKSDNYLVVSAALNAVCRLINEETIPAVLPQVVDLLNHPKEAVKKKAVMA
LHRFFQQSPSSVSHLVSNFRKKLSDNDPSVMGAALSPLFDLIKIDANSYKDLVGSFVSIL
KQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKHASEQMYTVLGDLIRKADASSN
IGNAVLYECVCCASVIHPSAKLLEAAADAISKFLKSDSHNLKYMGIDALGRLIKLSPEVA
EQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMININDSHYKTEIAS
RCVELAEQYAPSNQWFIQTMNKVFEHAGDLVNIKVVHNLMRLIAEGFGEEDDIVDGQLRL
SAVESYLQIIGEPKLPSTFLQVICWVLGEYGTAYGKYSASYITGKLCDVAEAYSTNDTVK
AYALTAIMKIYAFEKAAGRKVDMLPECQSLIEELSASHSTDLQQRAYELQAVIGLDAQVA
ESILPFDASCEDIEVDKNLSFLNGYVQQAIENGAQPYVSENQRSGIPNINNFLSQTQNAP
STHGLRFEAYEHPKPVEQPKPNLVSHVPSTELVSVPEPSYTRENHHVASVRPSSDAESNE
IKLRLDGVQKKWGRSNYSSTSSTSSSSQNANGLSQRDAGAVSLKPHDTSYNYKKQQVEID
PEKQKLAASLFGSTSKAEKQTSSTSYKSTKASSRVEKSQETKAVAEVPPRAPPPPDLLDL
GEPDNTSSSVIDPFTQLEGLLEQNPGASSTTTYNSSFVSSTKESDLMSLYGGVPMNTQPG
FVDTSKDSELLFGSTNKNGDALQSQGSKGFNLKDALQKDALVRQMGVTPTSQNPNLFKDL
FG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttgaagaccattggaagggagctcgcaatgggatcccaaggaggtttcgga
caatcgaaagaattcctagatctcgtcaaatcaatcggtgaagctcgatctaggtctgaa
gaagaccgcatcgttcttcatgagatcgaaaccctaaaacgtcgaatcatcgaaccggat
atccctaaaaggaagatgaaagagttcattattcgtcttgtttatgtagagatgttaggt
catgatgcttcttttggatacattcatgctgttaaaatgactcatgatgataatatactc
cttaaacgaactggatacttagctgttaccctttttctcaatgatgatcatgatcttatc
atcctcattgttaatactatccaaaaagacttgaaatctgataattatcttgttgtttct
gctgctttgaatgctgtttgtcgattgatcaatgaggagactattcctgctgttttgcct
caagttgttgacttgcttaatcatcctaaagaggctgttaagaagaaggctgttatggct
ttgcatcgcttttttcagcagtcaccttcttctgtttctcatctcgtctccaatttccgt
aagaagctatctgataatgatccgtccgtcatgggtgctgcactttctcctctatttgat
ctgattaagattgatgcaaattcctataaggatttagttggaagctttgtgagtatccta
aaacaagtagcagaaaggagattgcccaaaagctatgattatcatcagatgcctgctcca
tttattcagattaaattgttaaaaattctggcattgctgggtagtggtgataagcacgcg
agtgaacagatgtacactgttctgggtgacttaattaggaaggctgacgcatctagcaac
attggaaatgctgttctatatgaatgtgtctgctgtgcatctgtcatacatcccagtgca
aaattattggaagctgcagctgatgcaatatcaaagtttctgaagagtgatagtcataat
ttgaaatacatgggcattgatgcacttggccgactgatcaagctaagtccagaagttgca
gaacaacatcagttggcagtgatagattgcttggaggatccagatgattccctcaagcga
aaaacatttgaattactatacaagatgaccaagtcctctaatgttgaagtaattgttgat
cgtatgattgattacatgataaacatcaatgatagtcattataaaactgaaattgcatcg
cggtgtgttgaacttgctgagcaatatgccccaagtaatcaatggtttattcagacgatg
aacaaagtttttgagcatgcaggtgatttagtaaacatcaaggtggtgcacaacttaatg
cgtttgattgcggagggatttggagaggaagatgatattgtagatggtcagctgagatta
tctgctgttgagtcatatttgcaaatcattggtgagccaaagcttccgtctacattcctt
caagttatttgttgggtattgggtgagtatggaactgcttatgggaaatattctgcttca
tacattactggcaagctttgtgatgtagcagaagcttattcaactaatgatacagtcaag
gcttatgcacttacagctattatgaagatctacgcatttgaaaaagcagcagggagaaaa
gtggacatgcttcctgagtgtcagtcactaattgaagaactgtcagcatcccattcaaca
gatttgcagcagcgtgcatatgaactgcaagcagtcattggtttggatgctcaagttgct
gaaagcatactgccttttgatgcaagctgtgaggacattgaggttgacaaaaacctctca
ttccttaatggctatgtgcaacaagctatagaaaatggggctcaaccttacgtgtctgag
aatcaacgttctggaataccaaatatcaacaactttttaagccaaactcaaaatgcgcca
tccactcatggacttaggtttgaggcttatgagcatccaaagcctgtcgagcagccaaag
cctaatctggtttcacatgtgccttcaacagaacttgtctctgtgccagagccatcttat
actagagaaaatcaccatgttgcatcagtaagaccatcttctgatgctgaatcaaatgag
atcaagctacggcttgatggggtccaaaagaaatggggaaggtcgaattattcctctacg
tcttctacttcaagctcttcgcagaatgctaacggtctttcacaacgtgatgcgggtgct
gtaagcttaaaacctcatgatacttcttacaactacaaaaaacagcaagtggaaatcgat
ccggagaaacagaaacttgctgcttcactatttggtagtacatcaaaggcagagaaacaa
acgtcttcaactagctataaatctacgaaagcatccagtcgtgttgagaaatcccaagaa
acaaaagctgtggcagaggtaccaccacgagcgcctcccccacctgatttgcttgatttg
ggtgagcctgataacacaagtagttcagttattgatcctttcacacagttggaaggcctt
ctagagcaaaatcccggtgcatcatctacaactacatataattctagcttcgtcagttct
accaaagagtcagatcttatgtcactctatggaggtgttccgatgaacacgcaacctggc
tttgtggatactagtaaagatagtgaacttttatttgggtccaccaataaaaatggggat
gccctacaatcacaaggaagcaagggctttaatctgaaggatgcattgcaaaaggatgca
ttggttaggcagatgggtgttaccccaactagtcaaaatccgaatttgttcaaggacttg
tttggctaa
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