Amaranthus tricolor (tampala): 130800237
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Entry
130800237 CDS
T09367
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130800237
03036 Chromosome and associated proteins [BR:
atri03036
]
130800237
Transcription factors [BR:
atri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130800237
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130800237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
CHDNT
Motif
Other DBs
NCBI-GeneID:
130800237
NCBI-ProteinID:
XP_057519670
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All DBs
Position
14:complement(1175533..1183092)
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AA seq
637 aa
AA seq
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MADGHLFNNISLGGRGGTKQGQMRVHSGGVLWKKLDGGKAVEVDKTNIAGLFWMKVQRSN
QLGVRSKEGLYYKFTGFRDQDVATLTSFFKSSYVITPGEKQLSVSGHNWGDVDFNGNMLA
FMVGSKQAFEVSLADVSQTQMQGKNDVLLEFHVDDTTGANEKDSLMEISFHIPNSNTHFV
GDENRPSAQVFHDKIMSMADVDAEEAVVTFDGIAVLTPRGRYSIELHLTFLRLQGQANDF
KIQYSSVVRLFCLPKSNQPHTFVVITLDPPIRKGQTLYPHIVMQFEIDYVVESTLSISDE
LLNTKYKDKLEPSYKGLIHDVFTNVLRALSSAKVTRPGKFRSCQDGYAVKSSLKAEDGIL
YPLEKSFFFLPKPPTLILHEEIDYLEFQRHVVAGSNMHYFDLLVKLKTDQEHLFRNIQRS
EYHNLFDFISSKGLKIMNIGDGANQPSSPIAALSSDDDNVDPHLNRIRDAQDESDEEDED
FVADKDDGGSPTDDSEEDHSDASASGDDEERPPKKEKKELTSSKASSKKKSKDGDEEGSR
KRKQKKKKDPNAPKKAMSGFMFFSQAERENTKKENPGIMFTDIAKVLGEKWRNMSAEEKE
PYEAKARADKKRYNNQIGDYKNPQSANLDSENESDSN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggccatctcttcaacaacatctctcttggcggtcgtggaggcactaagcaa
gggcagatgagagttcattcaggtggcgttctttggaaaaagcttgatggaggaaaagct
gttgaggttgataagactaatatcgctggattattctggatgaaagtgcaaagatcaaat
caacttggagttagaagtaaagaagggttgtattataagtttacaggttttcgggatcag
gatgttgccacattgaccagttttttcaaaagcagctatgtaattaccccaggagagaaa
caactgtctgttagtgggcataattggggagatgttgacttcaatggtaatatgctggct
tttatggttggctcaaaacaagcctttgaggtatctttagctgatgtctcacaaactcag
atgcaaggaaaaaatgatgttttattggagttccatgtggatgataccactggtgccaac
gagaaagattctcttatggagatcagttttcacataccaaattccaacacccattttgtt
ggtgatgaaaatcgtccttctgctcaagttttccatgacaagatcatgtcaatggctgat
gtagatgcagaagaggctgttgtcacatttgatggtattgctgtccttactcctaggggt
cggtatagtattgaacttcatcttacgtttttacgtctccaaggacaagcaaatgatttt
aaaatccagtatagcagtgttgttcgtcttttctgtcttcccaagtcaaaccaaccacat
acatttgttgttatcactctagatcctccaattcgtaaagggcaaacgctgtacccacat
atcgtgatgcagtttgagatcgattatgtggttgaaagcaccctctccattagtgacgaa
ctcttaaataccaagtacaaagataagttggaaccttcgtacaagggtctcattcatgat
gtttttacaaacgtattgcgtgccctgtctagtgccaaggtcactaggcctggaaaattc
cgcagttgccaagatggctatgctgtcaagtcatcacttaaagctgaagacggaattttg
tacccgcttgaaaagagtttcttcttcttacccaagcctccaacccttattcttcatgaa
gagattgattatctggagttccaaaggcacgttgttgcgggatcaaatatgcattatttt
gatcttctggtaaagctgaagacagatcaagaacatctctttcggaatatccagaggagt
gaataccataatttgtttgatttcatcagctccaagggcttgaaaattatgaatatagga
gatggtgccaatcaaccttcaagccccattgcagctcttagcagtgatgatgataatgtc
gatcctcatttgaatcgtatcagggatgcacaagacgagagtgatgaagaggatgaagat
tttgttgccgacaaggatgatggtgggtctcctaccgatgactctgaagaagatcattct
gatgctagtgctagtggtgatgatgaagagaggcctcccaagaaagaaaagaaagagttg
acatcatcaaaagcttctagcaagaagaaatctaaggatggagatgaagaaggctcaagg
aagagaaaacagaagaagaaaaaagatccaaatgcaccgaagaaagcaatgtctggtttt
atgtttttctcgcaagctgagcgagagaatacaaagaaagaaaacccaggtataatgttt
acagatatagcaaaggttctaggggagaaatggagaaacatgtcagctgaggaaaaagaa
ccctatgaagcaaaagctcgtgctgataagaagcggtacaataatcaaattggtgactac
aagaatccacaatctgcaaatttggactcagaaaacgaatccgacagtaattaa
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