Amaranthus tricolor (tampala): 130800349
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Entry
130800349 CDS
T09367
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130800349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130800349
03012 Translation factors [BR:
atri03012
]
130800349
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130800349
Translation factors [BR:
atri03012
]
Eukaryotic type
Release factors
130800349
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
130800349
NCBI-ProteinID:
XP_057519810
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Position
14:complement(3170530..3174536)
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AA seq
437 aa
AA seq
DB search
MSDGQETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPKDQVARVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVEDTLKALEMGAVEILIVWENLDINRYMLKNGSTGEIVIKHLNKEQETDQSHFRD
ADTAAELEVQEKMSLLEWFANGYKNFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDDGENYDNSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggccaagagactgacaagaacattgaaatatggaaaatcaagaagttaatt
aaagccttggaagctgccaggggaaatggaacaagcatgatctctctcatcatgcctcca
aaagatcaagtagctagggttactaagatgttgggagatgaatacggtacagcttcgaac
atcaagagtagggtgaaccgtcaatctgtgctggcagctattacatctgcccaacagcgc
ttgaagctgtataataaggtacctcctaatggattggttctttacactggaacaattgtg
accgaggatggcaaggaaaagaaagtaactattgattttgagccattcagaccaataaat
gcttctctctatttgtgtgacaacaagttccataccgaggcactaaatgaacttctggaa
tctgatgacaagtttggcttcattgtcatggatggtaatgggaccttgtttgggactctg
agtgggaacaccagggaggtgcttcataaatttacagtcgatcttccaaagaaacacggt
agaggagggcaatctgctctacgttttgctcgtcttcgtatggagaagaggcataattat
gtgaggaagactgcagaacttgccactcagtttttcattaatccagctacaagtcagcct
aatgtttcagggcttatacttgctggatcagccgacttcaaaaccgagctcagtcagtcc
gacatgtttgatcctcgtcttcaggcgaagatactgaatgttgtggatgtttcatatggt
ggtgagaatggttttaaccaagcaatagagctgtctgctgaaattcttgccaacgtgaag
tttattcaggagaagaagttgataggaaagtatttcgaggagattagtcaggacactggt
aagtacgtctttggtgttgaggacacgctcaaggctttggaaatgggggctgtcgagata
cttattgtctgggagaatctcgatatcaacaggtatatgctgaaaaacggatcaactggg
gaaatcgttataaaacatttgaacaaggagcaagaaaccgaccagagccatttccgcgac
gcagacactgccgctgaattggaggtgcaggaaaagatgtcattgttggaatggtttgct
aatgggtacaagaattttggttgctctcttgaatttgtcactaacaaatcgcaagaagga
tcacagttttgcaggggattcggtggcattggaggaattcttcgttatcaacttgatata
agatccttcgacgagctttctgatgatggagaaaattatgacaattcagactag
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