Amaranthus tricolor (tampala): 130800381
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Entry
130800381 CDS
T09367
Name
(RefSeq) SAC3 family protein B isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130800381
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
130800381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
130800381
NCBI-ProteinID:
XP_057519849
LinkDB
All DBs
Position
14:complement(2319867..2337154)
Genome browser
AA seq
1578 aa
AA seq
DB search
MSFGFGKNSGPTAPPSGQTSFGNFPQPPSPAPSVSPFPDPNLSAGPRFLSPRTFDGHARV
RSPTSFVNDRLVTGPVQYAAPNNAFDYPTRARSPPSGVTDRQVTSSSQQYDSPIRHDKRN
SVPGEFVGQNHKRPFPSTLQDCATNIPSNFPQFQNPERSRSPPIQYNDDFLLDPVGDSMA
GNADVASNLHGHVATQRRQPTSSAAVNNHFLTNPQPSRSKSQRSSLSPPKMRSGKTGVGM
PDSQYSLKVSPSDDQMNGSTYMNRHFSHSVPKRTRSSTFADGQTIQSNSISIEDDSVREQ
QAKARRLARFKTELVESGPDNSIQYSQNISKGRVSSMKIDGTSMEKTNVSGDFSSGSMED
LDLDNENSQSTSIIVGLCTDMCPESERGERERKGDLDQYERLDGDRNQTSRTLAVKKYNR
TAEREAELIRPMPILQKTMDYLLGLLDHPYDDKFLRLYNFLWDRMRAIRMDLRMQHIFND
KAITMLEQMIRLHILAMHELCEFSKGEGFSEGFDAHLNIEQMNKTSVELFQLYDDHRKRG
IFIPTEKEFRGYYALLKLDKHPGYKVEPAELSLDLAQMTPEIRQTLEVLFARDVARSCRT
VNFIAFFRHARNASYLQACLMHAHFSKLRTQALAALHSGLLYNQGVPVARVSKWLGMEDE
DIESLLEYHGFSIKEFEEPYMVKEGPFLNDEKDYPTRCSILVCRKKSDTILKDVLSSHQV
IISPPKPSKELSSTENRKIKHTAVQKMSPVSDDGLMDIESESSLKRSMQVPLILERRSTH
IPLVLESPKSMQVQVDIGESKFGQPFVDNHHRTSSGSPKDNVKNFASFDNRSMFNQPSPV
SPKDSPRNFSVQQFVPAAKSSSFGLARHNSLKGPVASSPDIVAQSELKFLQPVAVSANVG
KLSTAFEAEPSVVSLKQDDVSIEELPTEEFSNVQEKVDDVADNHDKEVSEAKLRLLLRLW
RRRFLRKKYIREQNRISANAALSSLNLGPPIRQCQEKPTMFPKLNIDQAMNKRYKKRQLS
LARWNVSEVVSSNLAKKNENSNCICWKVITFSWLQHGRSDLEARGSASCLSLEEWLHYKL
IPVRKEEAEDDLVVSAPGLSVWRKWASDHSGHLRCCFSVIKDLQPGNFEKLDGVDALLFP
ISETLSWDTQKGQLENLVALLPVDAGIPLLIVSNVEKSSAKFSCSIVDKLGLKDLNKSRI
SRFIVIYLNEEDNVKFSGYFSDQKLKEGLRWLASESRSQPVPSCLTTRELVSFHLNSCLE
ALHLMGDKVGPYQCISAFNQALDQSINNIVTAANMNPTGWPCPEVFLLDDSTVEFRVVKQ
FLPSLGWSSPEVVGPLISSLRDCKLPSFSDDMSWMSRGCCTEKDIEDQKQLLQDCLIKYL
TKSSSVLNLMMATNESCLMVQKYTMLELHDTQYKVVPSWVPIFRRVFNWHLNSCSSFSCK
AYVLEHTLITRSSPIINKLEFEAPKHHYIAHPSLDELVEVSRSPNSSKRVRSSPKGFQRA
SAIAFDENTFEITMPNFVSEESNQLPETEVVENCDIQARNNGLLLVPENKKTADRLSQLL
DQCSILQDEIEKKLSFYF
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggatttgggaagaattcggggcctacagctcctccaagtgggcaaacctct
ttcggcaattttcctcaacctccttccccagctccctctgtttctccttttccagatcct
aatttgtccgctggtccccggtttctgagtcccaggacctttgatggccatgcgagagta
cggtcgccaacttccttcgtcaatgaccgtcttgtaactggtcctgtacaatatgctgca
ccaaacaacgcctttgattatcctacaagagcgcgatcacccccttctggggttactgac
cgtcaagtaacaagttcatctcaacaatatgattcaccaatcaggcatgataagcgaaat
tcagtacctggagaatttgttggtcaaaatcataagagaccctttccgtctactttacaa
gattgtgcaactaacataccttctaattttccgcaatttcaaaacccggaaaggtctaga
tcacctcctattcagtacaatgatgattttctgctggatccggttggtgattcaatggca
ggcaatgcagatgttgcctctaaccttcatggtcatgtagctacacagagaagacagcca
acttcttcagctgctgtcaataatcattttctcaccaacccccaaccttctcggagcaaa
tctcaaaggtcctctttatctcctccaaagatgaggagtgggaaaactggtgtcggaatg
cctgattcacaatatagcctcaaagtatctccgtctgatgatcagatgaatggtagcact
tatatgaacagacattttagccactctgttccaaagcgaactagatcatctacttttgct
gatggtcaaaccatccagtcaaactcaatttctattgaagatgactctgttagagaacaa
caagccaaggcaaggcgattagctcgctttaagactgaactagttgaaagtggaccggac
aattcaatccaatatagtcaaaatatttctaaaggaagggtttcttctatgaaaattgat
ggtacatctatggagaaaacaaatgtttcaggggatttttcttcaggatcaatggaggac
ctggatcttgataatgaaaactcgcaatcgactagtattattgtggggctgtgtactgat
atgtgtccagagtcagagagaggagaacgagaaaggaagggagatcttgaccagtacgag
aggttagatggggacagaaatcaaactagcaggacacttgctgttaagaagtataacagg
actgctgaaagggaagcagaattaattcggccgatgccaatcttgcaaaagacaatggat
tatcttcttggtttgcttgaccacccttatgatgataagttccttagattgtataatttt
ttgtgggatagaatgcgggcaatacgaatggacctgagaatgcagcacatttttaatgac
aaggctataactatgctggaacaaatgataaggcttcacatattagctatgcatgaattg
tgtgaattttcaaagggagagggattttccgaaggatttgatgctcacctcaatattgaa
cagatgaacaaaacatctgtagaattgtttcagctgtatgatgatcataggaagagagga
atctttattcctacagaaaaggaattccgtggctattatgcccttcttaagctggacaaa
catccgggttacaaagtagaacctgcagagctctcacttgatctagctcaaatgacacct
gagataaggcaaacactagaagttctatttgcccgtgatgttgcaagatcttgtagaact
gtcaattttattgctttcttccggcacgcaaggaatgccagctatctccaagcatgtcta
atgcatgcccacttctcaaagttgaggacacaagcacttgctgctctacactctggtctt
ctatataatcaaggggtccctgtggcgcgtgtttccaagtggcttggcatggaggatgag
gacattgagagccttctggagtatcatggattctcaataaaggaatttgaagagccgtat
atggttaaagaaggtccatttctgaatgatgaaaaggattatcccactcgatgttcgata
cttgtttgcagaaagaaatctgataccatcttgaaggatgtattatcttcacatcaagtg
ataatatcgccacccaagcctagtaaggagctttcatcaactgagaatagaaagattaag
catacagcagtgcaaaaaatgagtcctgtttctgatgatggactcatggacattgaatcc
gagtcatcactaaaacgtagcatgcaagttccactaattcttgaaagacgtagtacacac
atcccattagttctcgaatcaccaaaaagcatgcaagttcaagtagatattggagaatct
aaatttggtcaacctttcgtagataaccatcaccggacttcttcaggttctccaaaagat
aacgtaaagaatttcgcaagctttgacaatcggagcatgtttaaccaaccttctccagtt
tcacccaaggattctccacggaatttttctgtacaacaatttgttcctgctgccaagtca
tccagttttggattagctaggcataatagcttgaaaggacctgttgcaagttctccagat
attgttgcacagtctgagttgaagtttttacaaccagtagcggtttctgcaaatgttgga
aaactgtcaactgcttttgaagctgagcctagtgtcgtgagtttaaaacaagatgatgtt
tccatagaggaattgccgacagaagagtttagtaatgttcaagagaaagttgatgatgtt
gctgataaccatgataaggaagtttctgaggctaagcttaggctgttgctaaggctatgg
aggaggcgctttctaaggaagaagtatatccgtgaacaaaatagaatttctgcaaatgct
gctctaagttcacttaatcttgggccacctattcggcagtgccaagagaaacctacaatg
ttcccaaagctgaatattgatcaagctatgaacaaaagatacaaaaagcgccagttatca
ttggctagatggaacgtctcagaagttgtgtcaagtaatctggctaaaaaaaatgaaaac
tcaaactgcatatgttggaaggtaattacgttttcttggttgcaacatggtagaagtgat
ttggaagcaagaggttctgcatcatgtttatctctggaagaatggttacattataagctt
attccagttagaaaagaggaagcagaggatgatttggtcgtttctgctccaggcttatcg
gtttggagaaagtgggcttctgatcattcaggtcacttgaggtgctgcttttctgtaatc
aaagatttacagccaggaaatttcgagaagctagatggagttgatgctctcctgtttcct
atatcagagaccctctcgtgggatactcaaaagggccagctagaaaatcttgtggcattg
ttacctgttgatgctggcattcctcttttgatcgtaagtaatgtcgaaaaaagctctgct
aaattttcctgcagcattgttgataaacttggtcttaaggacctcaacaagtctcgtatc
agcagatttattgtaatttacctaaatgaggaggataatgtgaagtttagtggatatttt
agtgatcaaaagttgaaggaagggctaaggtggttggcttctgaatcacgttcacaacct
gtaccttcttgtttgacaacacgcgagttggtttcctttcatttgaattcatgtttggag
gcgctgcatctcatgggtgataaagtaggaccataccagtgtatttcagcctttaatcaa
gctttggatcaatctataaataatattgtaactgctgctaacatgaatccaactggctgg
ccttgtcctgaagtatttttgttggatgactccactgttgagttcagggtcgtcaagcag
ttcttgccatctttaggatggagctcacctgaagtagtgggtcccttaatatcttcttta
agagattgcaaacttccttcgttttctgacgacatgtcatggatgagccgaggctgctgt
actgaaaaggatatcgaagatcaaaaacagcttcttcaggattgtttgatcaaatatttg
actaaatcaagcagcgtgttgaacttgatgatggcaacaaacgaaagttgtttgatggtg
caaaaatacacgatgcttgagcttcatgatacacaatacaaggtggttccaagttgggtg
cccattttccggcgagtgtttaactggcatttaaatagctgttcaagcttctcctgtaaa
gcttatgttctagaacataccctcataactcgtagttctcccatcatcaataagttggaa
tttgaagccccgaaacatcactacattgctcatccttcattggacgagttggttgaggtt
agtcgcagccctaatagttcgaaaagagtaaggtcatcgccaaaaggttttcagagagcg
agtgcaatagcatttgatgagaatacctttgaaatcaccatgcccaattttgtttcggag
gagagcaatcagttaccggaaactgaagttgtcgagaactgtgacatccaagcgaggaac
aacggtttgctgttggttcctgaaaataaaaagacagctgataggcttagccaactgtta
gatcagtgtagtattttgcaagacgagattgagaaaaagctgtcattttacttctga
DBGET
integrated database retrieval system
