KEGG   Amaranthus tricolor (tampala): 130800520
Entry
130800520         CDS       T09367                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52A-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130800520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130800520
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     130800520
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_Gbeta ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_RIG_1st eIF2A Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Vps41 NBCH_WD40 Tricorn_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR75_1st KNTC1_N Peptidase_M10_C Beta-prop_VPS8 MIOS_WD40 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 130800520
NCBI-ProteinID: XP_057520088
LinkDB
Position
14:7242967..7252080
AA seq 499 aa
MAEDLTSLPPLQSSKPPLLINYPSKVARPSLSLDNMVDGPITPSRTIDRMINSHHYPSPS
RTILSDRFIPSRSSSNFSLFNVSPSSSFSSSPQSNKQPDGTREESNSTYTSLLRAALFGP
DAGCFFPGTPDKGLPNRNIFRFKSETKRPLPSLMPFGPDDALPGVTYRPAKIARKVPRSP
YKVLDAPSLQDDFYLNLVDWSSHNVLSVGLANCVYLWNACSSKVTKLCDVGIDDSVCSVG
WAQRGTHLAVGTNNGKVQIWDVSRSKRIRTMDGHRLRVGAVAWSSSVLASGSRDKNIFLR
DVRAQEDYVSKLTGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLRYSEHTAA
VKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSQLGCMDTGSQVCNLVWSKNVNELVST
HGYSQNQIIVWRYPTMSKLATLTGHAYRVLYLAVSPDGQNIVTGAGDETLRFWSVFPSSK
SQNTDTEVGFHSLGRTRIR
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggcggaagatctcacttctcttcccccattacaatcttcaaaaccaccattacttatc
aactacccatctaaagttgctcgtccttctctttcacttgataatatggtagatggtcca
attaccccatctcgcaccatcgatcgaatgatcaattcacatcactacccttctccttct
agaaccatcttgagtgataggtttattccttctagaagttcatccaatttctcccttttc
aatgttagcccttcttcttctttttcttcttctcctcagagtaataagcaacccgatggg
acaagagaagaatctaacagtacttatacttcccttcttcgggcggccctttttgggcct
gacgctgggtgcttcttccccggtactcctgataaaggtctacctaaccggaatattttc
cggtttaagtccgaaactaaacggccattgccctcgttgatgcctttcgggcctgatgat
gctcttccgggtgttacttatagaccggctaagattgccaggaaagtacccaggtcacct
tataaggtattggatgcaccatccttgcaggatgatttttatttgaacttggtagattgg
tcttcgcacaatgtactatctgtgggattagcaaattgtgtatacttgtggaatgcttgc
agtagtaaggtgaccaaattatgtgacgtgggtatcgatgacagtgtttgttcagtggga
tgggctcaacgtggtacgcatttggcggttggtacaaacaatggcaaagttcaaatttgg
gatgtttctcgttctaaaaggattcggactatggatggtcatcgtttgcgtgtgggcgct
gtggcgtggagttcatctgtgctggcttctggtagccgagataaaaatatattccttaga
gatgtacgtgctcaggaagattatgtcagtaaattaactggacacaagtcagaggtttgt
ggtctgaagtggtcatatgataatcgtgagctagcatcaggaggaaatgacaatagactt
tttgtgtggaaccaacattccactcaacctgtattaaggtattctgagcatacagcggca
gttaaagcaattgcttggtctccccacttacatgggcttcttgcatcaggaggtggtacg
gctgatcggtgcatccgtttttggaatacaactactaattcacagttgggatgtatggac
actggtagccaggtttgtaatcttgtgtggtccaaaaatgtcaatgaacttgtaagcaca
catggttactcccaaaaccaaataattgtttggagatatcctaccatgtcaaagctggct
acacttacaggccatgcatatagggttctctatcttgcagtttcaccagatggacagaac
attgtaactggagccggagatgaaacactcagattttggagtgtcttcccgtcttcaaaa
tctcagaacacggacactgaggttggatttcactctcttggaagaacgcgaattcgatag

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