Amaranthus tricolor (tampala): 130800528
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Entry
130800528 CDS
T09367
Name
(RefSeq) nucleoporin NUP152-like isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130800528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130800528
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130800528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
130800528
NCBI-ProteinID:
XP_057520101
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All DBs
Position
14
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AA seq
438 aa
AA seq
DB search
MIGTKRRSVSLSSNADDNPFQSKKTVAESPVGGQETAVLPSPEVKIVATPSLDRRKAAQQ
HVRALNTEFASWVQCQLRDHPDELWEDGLKDYVSQASNIREKFTDVVNWLKAKTDSEGST
SFLGTQVSEKQKALETNIKDLKSSTFVFGSSANTGFIPPSNSGTSSTTSVLSSTSSAPSW
SFGLSASSQALSQDTSAPPVTSWSSGVSLNTKSVSPVKTGSLFTSPSFGVSSNNQATSST
TTSFMKSTSSGIFPNKTPSFGSFNVGIPSNGQATFTFGNHKPDATNESNKEDVDDDNEPE
QPSSPSVKSSEEKGITVVHETKCKLYVKSTDPADKEPWKDKGAGKLFIKCLEAATKGTKE
SKPRILVRNDVGRIMLNASLYPGIKTSLQKNAIVTIFHTSEDSGENVKAIARTFLIRVKN
EEERDKLADTIREHAPMA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgattggtactaagcgtcgaagtgtttctttaagttcaaatgctgatgataaccctttt
caaagcaaaaagaccgtagcagaatctccagtaggtggtcaagaaactgcagtcttacca
tcacctgaagtgaaaatagttgcaacaccatctttggatcggcgcaaggctgctcaacaa
catgtgagggctttaaatactgaattcgcaagttgggtgcaatgccagttacgagatcat
ccagatgaactttgggaagatggtctcaaggactacgtaagccaggcttccaacatacgg
gagaaattcactgatgttgtcaattggctaaaagcaaagactgatagtgaaggtagtaca
tcttttttgggaacccaggtcagtgaaaagcaaaaggcactggaaacaaacatcaaggat
ctaaaatctagcacttttgtgtttggtagtagtgccaacacaggcttcatacctccttca
aactccggcacatctagcacaacctcagttctcagctcaacaagttcagcgccttcatgg
agtttcggtttatctgcgagtagtcaagctctttcacaagatacgagtgctcctccagta
acttcgtggagttcaggagtatccttgaatactaaatcagtgtcacctgtaaaaactggt
agtcttttcacttcacctagttttggagtatcatcaaataatcaagcaacctcatcaact
actaccagctttatgaagtctacaagttcgggaatattcccaaataaaacaccatctttt
ggttctttcaatgttggaattccctcgaatggtcaagcaactttcacgtttgggaatcat
aaaccagatgctacgaatgaaagtaataaagaggacgtggatgatgataatgaacccgag
caaccaagtagcccatccgtgaaaagctctgaagagaaaggtatcactgtggtgcatgaa
accaaatgcaagctctatgtaaagtcaactgatccggctgacaaggagccatggaaggat
aaaggtgctggcaaactcttcatcaaatgtttggaggctgctacgaagggtacaaaggaa
tccaaaccaaggatacttgtccgtaatgatgttggaaggataatgcttaacgcttcatta
taccctggcatcaagacaagtttgcagaaaaatgccattgtgaccatattccatacttcg
gaagatagtggagaaaatgttaaagctattgctcgtacgtttttaatacgagtaaaaaac
gaggaggaaagagataagttggcggatactatacgtgaacatgcaccaatggcttga
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