KEGG   Amaranthus tricolor (tampala): 130800615
Entry
130800615         CDS       T09367                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130800615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atri03041]
    130800615
Spliceosome [BR:atri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130800615
 Complex B
    130800615
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 SAP CTK3
Other DBs
NCBI-GeneID: 130800615
NCBI-ProteinID: XP_057520142
LinkDB
Position
1:12041713..12063383
AA seq 923 aa
MNSFSITKKKTPFKKHRDEQEAKKKRAEDETARLYEEFLESFQAEDVPGSKGFFRGGLIN
PNERVKTDSEGGNSKDGVSGSKKGSRYVPSFLPPSMATKARVLEKEELDEKSKEKEKRRT
RNIDNLMEEIRLEQEMREKRNQEREKWRDGRLEEQSTTFTRFDELPDEFDASGRGSCDEG
DLQSTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEPERIRQKNCGFVSFMNRG
DAQAAKDEMQGIVVYDFELTLGWGKSVSLPSQALPAPPPGHMAIRSKEGGTVILTGSWIP
VAPVPNQNSELVLTPNVSDITVMPPEDRHLRHVIDTMALYVLDGGCAFEQAIMERGRANP
VFSFLFDLCSKEHMYYVWRLYSFAQGDTLHRWRTEPFIMITGSGRWVPPPLPTAKSPDLV
MESGITYAGRRGKRVDPERTLTDSQRDEFEDMLRALTLERSQVKDAMGFSLDNADAAGEI
VQVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDL
YRSVSGRITAEALKERVLKVLQVWSDWFFFSDAYVNGLRDTFLRPSSSGAVSFHSICGNA
PELEEKLSRPEDMSDRIKINPDVALAMGKGAAMKELLSLPLPELERRCRHNGLSLVGGRE
MMVARLLYLGEAEKQRESELVEDLKFVQTQPSSGRYANVQKDMNVEMDSARSTAFSYYRD
DEIVSIARESNALPKALSIPQPELKEFSKIGKAETVLPASKWAREEEDDEPKQRSRGLGL
SYSSSGSENAADHNAEDDEIAAQTSTACQPKITISEEQRQKLRRLEVALMEYQESLEERG
IISPDDVERKVTVYRKRLESEYGLSESGEDLSRSKRTSERRDKKNDLQESSGKRQRSRSR
SGTPSRRGSNRYKEISNRDYRGK
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgaattctttctcaatcactaagaagaagactccattcaagaagcatcgagatgaacaa
gaagcaaaaaagaagagggcagaagatgaaacagctcgtttgtatgaggaatttctggaa
tcgttccaagcggaagatgttcctgggtcgaagggattttttcgaggaggattaatcaat
cctaatgagagagtaaaaactgactctgaaggtggaaattctaaagatggtgtatctggt
tcaaagaaggggagtagatatgtcccatcattcctaccaccatccatggcaactaaagcc
agagtattggaaaaggaggaacttgacgagaaatcaaaggagaaagagaaacggagaaca
agaaatattgacaatttgatggaggagataaggctggagcaggagatgcgagaaaagaga
aatcaagagcgtgagaaatggcgtgatgggcgtcttgaagaacaatcaacaacatttact
cgatttgatgagcttccagatgaatttgatgctagtgggaggggctcttgtgacgaaggt
gatcttcaatcaaccaatttgtatgttggaaatttatcgccaaaggttgatgaaaatttt
cttttacggacctttggaaggtttggacccattgctagtgtaaaaattatgtggccaagg
acagagccagaacgaattcggcaaaagaattgtgggtttgtttcttttatgaataggggt
gatgcacaggctgctaaggatgaaatgcaagggattgtcgtgtatgattttgaattgaca
ttaggatggggtaaatcagtttctcttccatcacaggcgctacctgcacctccacctggt
catatggcaatcagaagtaaagagggtggcactgtaatcttaactggttcttggattcct
gtggcacctgtcccaaatcaaaattctgagctggttcttactcctaatgtctcagatata
acagttatgcctcctgaggatagacatcttcgccacgtcattgataccatggctttatat
gttttagatggaggttgtgcttttgagcaagcaattatggagcgtggccgggctaatcct
gttttcagcttcttgttcgatctttgttcaaaggaacatatgtactatgtttggaggctg
tattcttttgctcagggtgacacgctccatagatggaggactgaacctttcattatgata
actggtagtgggaggtgggtgccacctcctctccctacagcaaaaagtccagaccttgtg
atggagtctggcataacttatgctggacgacgaggcaagcgtgttgatcctgaaaggaca
cttacagattctcagagggatgagtttgaggatatgctacgtgctttgacactagagaga
agtcaggtcaaagatgctatgggattttccttggataatgctgatgcggcaggcgagata
gttcaagtgctaacagagtctcttacccttaaagaaacaccaatacccacaaaagttgca
agattgatgcttgtgtctgacattcttcataatagtagcgctcctgtgaagaatgcatct
gcatatcggacaaaatttgaggcaacattgcctgacataatggagagcttcaatgacttg
taccgtagtgtaagtggaagaatcaccgccgaagctctcaaggagagggtgttgaaagtg
cttcaggtttggtcagactggtttttcttctcagacgcttatgtaaatggattacgtgat
acttttcttcgacccagctcttctggggctgtttcttttcattccatatgtggtaacgca
ccagaactggaagagaagttgagccgtcctgaagatatgagtgataggatcaagattaac
cccgatgtggcattggctatgggcaagggagctgctatgaaagagctgttaagcctccct
ctccctgagctggagaggcgttgtaggcataatggactttcacttgttgggggtagggaa
atgatggttgcccgattgctttatcttggggaagcagagaagcaacgagaatctgaactg
gtagaggatttgaaatttgtacagactcagccgagctctggtagatatgcaaatgtgcag
aaagacatgaatgttgagatggattctgcaagatcaacagcttttagctattatagggat
gatgagatagtctctatagcaagagaatctaatgctctgccgaaagcactctccattccg
caacctgaactaaaagaattctcaaagatagggaaagcagagactgtcttgccagcctct
aagtgggctcgagaagaagaagatgatgagcctaagcaaagatctagaggtctagggctg
agttactcctcatctgggagtgagaatgctgcagatcataatgccgaggatgacgagatt
gctgctcagactagtactgcatgtcaacctaaaattactatcagtgaagaacagcgacaa
aaattgagacgtctagaagttgcactgatggaataccaggagtctctggaggaacgaggt
atcataagtccagatgatgttgagcggaaggttacagtttacaggaaacgtctggaatca
gagtacgggttgtcagagtcgggtgaagatctttccaggagtaaaagaacatcggaaagg
cgagacaaaaagaatgatttgcaggagtcctctgggaaacgacaacgtagcaggagtcga
agtgggaccccttcaagaagaggatcgaataggtataaggaaatcagcaacagggattac
cgtggtaagtag

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