Amaranthus tricolor (tampala): 130800620
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Entry
130800620 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130800620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130800620
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130800620
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130800620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
130800620
NCBI-ProteinID:
XP_057520148
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All DBs
Position
15:11090162..11094694
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AA seq
305 aa
AA seq
DB search
MATGSPYFDELRGKPEVIDPPLSDDTIDVVEHVMDPSQSASKTNLTVSSSVNELLECPVC
LTAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF
GCIGIYPYYSKLKHESQCSFRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN
HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGLAPVYIAFLRFMGDDNDAKNYT
YSLEVGGNGRKLSWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
IWKEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcaactggaagtccatattttgatgagcttaggggaaaacctgaagttattgatcct
cccttgagtgatgataccattgatgttgttgagcatgtgatggatccttcgcaaagtgct
tcaaaaacaaatttaactgtatcaagcagtgtcaatgagctactggagtgcccagtatgc
ctaactgctatgtatcctccaatccaccagtgttcaaatggccacacaatatgttctggt
tgcaagcccagggtgcataaccggtgcccaacttgcagacatgagcttggtaatattaga
tgccttgccttggagaaggtggctgcatcccttgaacttccatgtaaatatcaaagtttc
ggatgcattggcatatatccgtactatagcaagctaaagcatgaatcccaatgttctttt
cgaccctataactgtccttatgctggatcagaatgcaccgtcattggggatatcccatac
ctggttgcccaccttaaggatgatcataaagttgacatgcacaatggaagcacatttaac
catcgctatgtgaagtcaaatcctcaggaagttgaaaatgctacttggatgcttacagtt
ttcagctgctttgggcaatacttctgccttcattttgaagcgttccagctcggtttggct
cctgtttacattgctttcttgcgattcatgggggatgacaatgatgcaaagaattacact
tacagccttgaggtaggaggaaatggaagaaagttgagttggcaaggtgtgcctaggagc
attagggatagccatcgtaaagtgcgtgacagctttgatgggctcataatccagcgaaat
atggcccttttcttttcgggtggtgatcggaaggagttgaaactgagggtgaccggaaga
atttggaaagaacagtga
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