Amaranthus tricolor (tampala): 130801292
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Entry
130801292 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130801292 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130801292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130801292
03012 Translation factors [BR:
atri03012
]
130801292
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130801292
Translation factors [BR:
atri03012
]
Eukaryotic type
Release factors
130801292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
DUF5096
Motif
Other DBs
NCBI-GeneID:
130801292
NCBI-ProteinID:
XP_057521091
LinkDB
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Position
15:complement(19596833..19622096)
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AA seq
512 aa
AA seq
DB search
MDLSEEIRALQLDSSEDNGAIDVETKPQEVDGLVKTKEDIEESSNADHFHIDTKDQRKME
ASVHGVNETFVHDANEEAKNKKRHLNVVSIGHVDAGKSTIGGQILFLSGQVDDRTIQKYE
KEAKDKARDSWYMAYIMDTNEEERSKGITVEVGRAHFETEKTRFTILDAPGHKSYVPNMI
SGASQADIGILVISARKGEFETGYEKGGQTREHVLLAKTLGVSKLIVVVNKMDEPTVNWS
KERYDEIESKMIPFLKSSGYNVKKDVHFLPISGLAGSNLKTRMDKSVCPWWNGPCLFEVL
DAVEVPTRDPSGPFRMPIIDKFKDMGTVVMGKVESGSIQEGDSLIVMPNKVNVKVVAVYV
DENKVKCAEPGENLRVRLSGIEEEDILSGFVLSSISKPIPAVNEFVAQLQILELLDNAIF
TAGYKAVLHVHSVVEECEIVELLQQIDRKTGKPMKKKVLFVKSNTIVVCRIQVNNLICVE
KFSDLAQLGRFNLRTEGKTVAVGRITDFGNSA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggatctttcagaagaaatacgtgctttgcagcttgattcatctgaagataatggggca
attgacgtggagacaaagccacaagaagttgatggtctagtcaaaacgaaagaagatatt
gaggagtcttctaatgccgatcattttcatatcgatacaaaagatcagagaaagatggag
gcttctgtccatggagtgaatgaaacctttgtccatgatgccaatgaagaggctaagaac
aagaaacgccatctcaatgttgtatctattggtcatgttgatgctggcaagtcaacaatt
ggtggtcaaatactttttcttagtgggcaggtcgatgatcgtactatccaaaaatacgag
aaagaagcgaaggataaagcaagagacagttggtatatggcatacattatggataccaat
gaagaagaacggtctaagggtataacagttgaagttggaagagcacattttgagaccgag
aaaactagattcaccattttggatgcaccgggtcataaaagttatgttcctaatatgata
agtggggcttcacaagctgacattggcattttggtgatatctgctcggaaaggagagttc
gaaactggatatgaaaaaggaggtcagacccgtgagcacgtcttacttgcaaagacctta
ggtgtttccaagcttatcgttgtggttaacaagatggatgagcctactgtcaactggtca
aaggaaaggtatgatgaaatagagtcaaaaatgattcctttcttgaaatcttcaggctac
aatgtcaaaaaagatgtccattttcttccaatatcaggtttggccggatcaaacttgaag
acaagaatggacaaaagcgtatgcccctggtggaatggtccatgtcttttcgaagtgcta
gatgctgttgaagtccctacacgagatcctagtggcccttttaggatgcccatcatagat
aaatttaaagacatgggaactgttgtcatgggtaaagtagaatctggctcaatacaagag
ggtgactcattaattgtcatgccaaacaaggttaatgtgaaagttgttgccgtatatgtt
gatgaaaataaggtcaaatgtgcggaacctggtgaaaatctaagggttagattgtctggg
attgaagaagaagatatattgtcgggctttgtcttgtcaagcatttctaagccaattcca
gctgttaatgaatttgttgctcaattgcagatccttgagttgcttgacaatgcaattttt
actgctgggtacaaggcagttttgcatgttcattctgtcgttgaagaatgcgaaattgtg
gagctactgcaacaaattgatagaaagactgggaaaccaatgaaaaagaaggttcttttt
gtaaagagcaacacgattgttgtgtgccggatccaggtgaacaacttaatatgcgtggag
aagttttctgatcttgcccagcttggaagatttaatcttcgaactgaagggaaaactgtt
gctgttgggagaattactgattttggaaacagtgcttaa
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