Amaranthus tricolor (tampala): 130801316
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Entry
130801316 CDS
T09367
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130801316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130801316
Spliceosome [BR:
atri03041
]
Common components
Common spliceosomal components
SR proteins
130801316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
130801316
NCBI-ProteinID:
XP_057521123
LinkDB
All DBs
Position
15:6599987..6603727
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AA seq
314 aa
AA seq
DB search
MPRYGDRGDRGDRHGSGTRLYVGHLSSRTRTHDLDDIFSRYGRVRDVDMKRDYAFVEFSD
PRDAEDARYSLNGRDVGGSRIIVEFAKGTPRGPGGLRDFGGRGPPPGSGRCFNCGIDGHW
ARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRRGRSYSRSPSPRRRSPSPRRGRSRSR
SFSRSRSYSRSRTPPRRDTERSRSPRQSRSPRRQKGSPVASRGKKHSPSPDERSPDVRGS
PSDRDERQANGSDYGGSPRLRSRSPMIEGKRGSPRNEDGRSQSPYEVNGRDRSVSPVARN
EKNDVYEASPRSSG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttacggagatcgtggagatcgtggagaccgtcatggcagtggtactcgtctc
tatgttgggcacctttcttcgcgtaccagaactcatgacttggatgatatttttagccga
tatggaagagtacgtgacgtggacatgaagcgcgattatgcctttgttgagtttagtgat
ccccgtgatgctgaagatgcaagatatagtctaaatgggcgtgatgttggtggtagtcga
attattgtcgagttcgcaaaggggacaccacgtggtccaggtggtttgcgtgactttgga
ggcagaggacctcctcctggatccgggagatgctttaattgtggaattgatggccattgg
gctcgagattgcaaagcaggtgactggaagaacaagtgctaccgctgtggagagcgaggg
cacatagaaaggaactgtcaaaacagcccaaagaaactaagacgtggtcgaagttattca
cgctcgccatctcctcgccgtcgttccccatcacctcgccgaggtagaagtcgtagccgc
agctttagcagaagccgtagctacagtcggtcgaggactccacctagaagagatactgag
aggtcaaggagccctcgtcaaagcaggagccctagaagacaaaaaggttctcctgtggca
tccaggggcaaaaaacactctccatcaccagatgagaggagcccagatgtcagaggtagc
ccttctgatagggatgaaagacaagcaaatggttctgattatggcggtagccctaggtta
aggagcagaagccccatgatagaaggcaaaagaggtagccctaggaatgaagatggtcga
agtcagagcccctacgaggtaaacggaagagaccgaagtgtcagccctgttgctagaaat
gaaaagaatgatgtctatgaggcttctcctagaagcagcggttaa
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