Amaranthus tricolor (tampala): 130801511
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Entry
130801511 CDS
T09367
Name
(RefSeq) COP1-interactive protein 1
Organism
atri
Amaranthus tricolor (tampala)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
HIP1_clath_bdg
Crescentin
HMMR_N
ATG16
FPP
KIP1
ACBP4_C
DUF3584
ERM_helical
CENP-F_leu_zip
Csm1_N
Filament
DUF2968
Fez1
Motif
Other DBs
NCBI-GeneID:
130801511
NCBI-ProteinID:
XP_057521360
LinkDB
All DBs
Position
15:859441..874029
Genome browser
AA seq
2425 aa
AA seq
DB search
MTRKHRIRSSIKSFIEKHTDPEQHEKFKETRKDMEEKKKKLLNLVESNEENEESKKGPIA
ELIEDFHKQYESLFSHYDHLTGKLKEKADKPQQEKEKFSSSSSESDSDSDHSSKGKESKN
GKLEDENKASDGLQQELEATKLAVADLKNELAAIHNEKVALESEYKAVLSKQEDSDRTVE
ELKAEVQKLDSEKSDILADREALKSKLEHSVKAESELSQKIEELMKERDNIATEKEDAFK
RLEEENHNVEKLKGEVDQLRSEKKNLELELEATLKEVSEIKVELDSSKQEIESLKESIRV
AEEAKDSLSQNILQVTDELKQALNTVEELKAESANSNEKLAEREKEFTSLREMHDAHTAG
STEQIQALEKQINNLKLELDSSKQETENLKGSVNAAEEESRSLSLKISQLNEDLKMAQET
VEELKSEANNSKEKLAEREIELSSLRAMHDTHITESSEQIKGLEEQIDSLKFKLDSSKQE
AENLQVLLKSAEEEKKSLSLKISQLNDNLKVAQDTIKELTVEANNSKEKLAEREVEFSSF
REMHDAHKTGSSEQIKALEEQINSSKLELNSSKQETENMKDAMKSAEEENTSLSQKISQL
NDDLKVARDRVEDLEAEANNSKEKLAQREVEFSSFREMHDAHKTGSSEQIKALEEQINSL
KLKQNSSKQETEKMKNAMKSAEEENSTLSQKISQLNDDLKVVHDRVEELEAEANNSKKKL
ADREDEFSSFREMHDAHKTGSSEQIKTLEEHISSLKLELDSSKQKTEILKESMKSAEEEN
SSLSQKISQLNDDLKVAHDRVEELEAEANNSKEKLAEREIEFLSFRDMHDAHKTGSSEQI
KSLEEHISRLKLELDSSKQETEILKESMKSAEEENNSVSQKIFQLNDDLKAAHDRVEKLE
AEANNSKEKLAEREVEFSSFKEMHDAHKTGSSEQIKSLEEHITSLKLELDSSKQETEIFK
ESMKSAEEENNSLSQKISQLNDDLKVAHDRVEELEAEANNSKEKLAEREVEFSSFRDMHD
AHKTGSSEQIKTLEEHISNLKLELDSSKQEIEILKESMKSAEEENSSLSQKISLLNDNLK
VAHDRVVELEAEASNSKEKLAEQEVEFSSFRDMHDAYKTGSSEQIKTLEEHISSLKLELD
SSKQEIEILKESMKSAEEENNSLSQKISQLNDDLKTAHDRVEEHEAEANNSKEKLAEREV
EFLSFREMHDAHKTGSSEQINSLEEHISSLKLELDSSKQETEILKESMKSAEEENSSLSQ
KISQLNDDLKVAHNRVVELEAEASNSKEKLAEREVEFSSFRDMHDAHKTGSSKQIKTLEE
HISSLKLELDSSKQETEILKESMKSAEEENNYLSQKISQLNDNLKVAHDRVEELEAEENK
SKEKLAEREVEFSSFRDMYDAHITGSSEQIKTLEEQINSLKLELDSSKQEIEILKESMKS
AEEENSSLSQKISQLNDDLKAAHDRVEELEAEANNSKEKLAEREVEFSSFREMHDAHKTG
SSEQIKSLEEHISSLKLELDSSKQETEILKESMKSAEEENSSLSQKISQLNDDLKAAHDK
VEELEAEASNSKEKLAEREVEFSSFREMHDAHKTRSSEQIKSLEEHISSLKLELDSSKQE
IEILKESMKSVEEENNSLSQKISQLNDDLKAAHDRAEELEAEANNSKEKLAEREVEFSSF
RDMHDAHKTGSSEQFKSLEEHISNLKLELDSSKQETEILKESMKSAEEEKNSLSQKISQL
SDDLKAAHDRVEELEAEANNSKEKLAEREVEFSSLRAMHDEHATGSSKQIKAFEEQTNSL
KLDLETLMGVKRKLEEQFGGKDAEARELGEEITVLKGQISQMEMMSKEREEYISSLQEKL
EFSENESNVRTEALNSQVNEITQQIEKLCTEKSQLEELIVTKGDEASALIEELQDQISSL
EHEMKTLQIQEKEMKLDLERKDEDIAAYRMQVEGLHEKFTSSDVLLKLFFEEKEALTAQL
KDRDLEVEKLHSHKTGLEEQLRTTRNEVTQLREEIEKLQTRIQELEKSLQEKEELSTAMQ
KRLEDGENEASLKITALGAEIDYLKQESEEIRAIKSQLEAQIEKEKQEYLEGLNLLQTEN
AELKAQIGNHLKTVKELEDEMNNRKEQWEQLESRVQARESEIQEAERRIKELKEELSMSS
ESKDEKIIELELLVENLKKDLEVATDEEKTAWEKTRTIEVQLRLTNQKLRITEQLLIEKE
EGFRIAKVKYQEECKELEDQVTRLSQVLAANNEAYRGMIMDISEHMNRLLAEMKSTTKKF
EDDQDKFSNIIFNMSEQVQILKHCAVGRNVEICELKDQLISVTEHLRNEKEQRLMMSDKI
GKLEVEFDSEKGEKEKLFVAVSELKKATGEMDVALKEQEERLTTLGEEKRQAIRQLCLWC
DNVRIQYEELKMMVSKVNAQRSQGR
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggaagcatcgcatcagaagttcaataaagtcttttattgaaaagcataccgat
cctgaacaacatgagaagttcaaagaaacgcgaaaagatatggaggagaagaagaaaaaa
ttgctaaaccttgtggaaagcaatgaagaaaatgaggaatcgaaaaaagggcctattgct
gaactcatagaggatttccacaaacagtatgaatcactcttttctcattatgatcatctc
actggtaaactgaaggagaaagctgacaaaccacaacaggagaaagagaaattttcttct
tcctcttcagaatcggactcagactctgatcattcatccaagggaaaagaaagcaaaaac
ggtaaactagaagatgaaaataaagccagtgatggattacaacaagagcttgaagcgaca
aaactcgcagttgcagatctcaagaatgagctggcggccatacataatgagaaagtggct
cttgaatcagagtacaaggcagtattatcaaagcaagaagattcagacagaacagttgaa
gaattgaaagcagaggttcaaaaactggattctgagaaatcggatatcctggcagataga
gaagctttgaagtcaaaattagagcactctgtcaaggcagaatctgaactgagtcaaaaa
attgaagaactcatgaaagagcgagataatatagccactgaaaaagaagatgcatttaaa
agacttgaagaagagaaccacaatgtagaaaagttaaaaggcgaggttgatcagttgcgg
agtgagaagaaaaaccttgagctagaattggaggcgactttaaaggaagtgtctgagata
aaagtggagctagattcatcaaaacaggaaattgagagcttgaaggagtccattagagtt
gctgaagaggcaaaagattctctttctcaaaacatattgcaagtgaccgatgaactcaag
caggcactgaatactgtggaagagctgaaagcagagtctgccaactctaatgaaaagttg
gctgagcgggaaaaagaattcacttccctaagggagatgcatgatgctcatacagctggt
tcgactgaacaaatacaagcattggagaaacagatcaacaacttgaaactcgaactagac
tcatcaaagcaagagacagaaaacttgaaggggtccgtgaatgctgctgaagaggaaagc
agatctctttctctgaaaatttctcaattaaacgaggatctcaagatggcacaagaaacc
gtggaagaactgaaatcagaggcgaataactcaaaagaaaagttggctgagcgggaaatc
gaattatcatccctgagggcgatgcatgatacacatataactgaatcttcagaacagata
aagggattggaggaacagatcgacagcttgaaattcaaactagactcgtcaaaacaagag
gcagaaaacttgcaagtgttattgaaatctgcggaggaggaaaagaagtccctttctctg
aaaatttctcaattgaacgacaatctaaaggtggcacaggatactattaaagagttgaca
gtagaagcgaataactcgaaagaaaaattagctgagcgggaagttgaattctcatccttc
agggagatgcatgatgctcataaaactggatcttctgagcaaataaaggcattggaggaa
cagatcaacagttcgaaactcgaactaaactcatcaaaacaggagacagaaaacatgaag
gatgccatgaaatctgcagaagaggaaaacacctctctttctcagaaaatctctcaattg
aacgatgatctcaaggtagcacgggatagagtggaagatcttgaagcagaggcgaataac
tcgaaagaaaaattagctcagcgggaagttgagttctcatccttcagggagatgcatgat
gctcataaaactggatcttctgagcaaataaaggcattggaggaacagatcaacagtttg
aaactcaaacaaaactcatcaaaacaggagacagaaaaaatgaagaatgccatgaaatct
gcagaagaggaaaacagcactctttctcagaaaatctctcaattgaacgacgatctaaag
gtagtacatgatagagtggaagagctagaagcagaggcgaataactcaaaaaaaaaatta
gctgaccgggaagatgaattctcatcctttagggagatgcatgatgctcataaaactgga
tcttcagaacaaataaagaccttggaggaacatattagcagcttgaaactcgaactagat
tcgtcaaaacaaaagacagaaatcttgaaggagtccatgaaatctgcagaagaggaaaac
agctctctttctcagaaaatctctcaattgaacgacgatctaaaggtagcacatgataga
gtagaagagcttgaagcagaggcgaataactcgaaagaaaaattagctgagcgggaaatt
gaattcttatccttcagggacatgcatgatgctcataaaactggatcttcagaacaaata
aagtccttggaggaacatattagccgcttgaaactagaactagattcgtcaaaacaagag
acggaaatcttgaaggagtccatgaaatctgcagaagaggaaaacaactctgtttctcag
aaaatctttcaattgaacgacgatctaaaggcagcacatgatagagtggaaaagcttgaa
gcagaggcgaataactctaaagaaaaattagctgagcgggaagttgaattctcatccttc
aaggagatgcatgatgctcataaaactggatcttcagaacaaataaagtccttggaggaa
catataaccagcttgaaactcgaactagattcgtcaaaacaagagacagaaatcttcaag
gagtctatgaaatctgcagaagaggaaaacaactctctttctcagaaaatctctcaattg
aacgatgatctaaaggtagcacatgatagagtggaagagcttgaagcagaggcaaataat
tcgaaagaaaaattagctgaacgggaagttgaattctcatccttcagggacatgcatgat
gctcataaaactggatcttcagaacaaataaagaccttggaggaacatatcagcaacttg
aaactagaactagattcgtcaaaacaagagatagaaatcttgaaggagtctatgaaatct
gcagaagaggaaaacagctctctttctcagaaaatctctctattgaacgacaatctaaag
gtagcacatgatagagtggtagagcttgaagcagaggcgagtaactcgaaagaaaaatta
gctgagcaagaagttgaattctcatccttcagggatatgcatgatgcttataaaacggga
tcttcagaacaaataaagaccttagaggaacatatcagcagcttgaaactcgaactagat
tcgtcaaaacaagagatagaaatcttgaaggagtccatgaaatctgcagaagaggaaaac
aactctctttctcaaaaaatctctcaattgaacgatgatctaaagactgcacatgataga
gtggaagagcatgaagcagaggcgaataactcaaaagaaaaattagctgagcgggaagtt
gaattcttatccttcagggagatgcatgatgctcataaaactggatcttcagaacaaata
aactccttggaggaacatatcagcagcttgaaactcgaactagattcgtcaaaacaagag
acagaaatcttgaaggagtccatgaaatctgcagaagaggaaaacagctctctttctcag
aaaatctctcaattgaacgacgatctaaaggtagcacataatagagtggtagagcttgaa
gcagaggcaagtaactcaaaagaaaaattagctgagcgagaagttgaattctcatccttc
agggacatgcatgatgctcataaaactggatcttcaaaacaaataaagaccttggaggaa
catatcagcagcttgaaactcgaactagattcgtcaaaacaagagacagaaatcttgaag
gagtccatgaaatctgcagaagaggaaaacaactatctttctcagaaaatctctcaattg
aacgacaatctaaaagtagcacatgatagagtggaagagcttgaagcagaggaaaataag
tcgaaagaaaaattagctgagcgggaagttgaattctcatccttcagggacatgtatgat
gctcatataactggatcttcagaacaaataaagaccttggaggaacagatcaacagtttg
aaacttgaactagattcgtcaaaacaagagatagaaatcttgaaggagtccatgaaatct
gcagaagaggaaaacagctctctttctcagaaaatctctcaattgaacgacgatctaaag
gcggcacatgatagagtggaagagcttgaagcagaggcgaataactcgaaagaaaaatta
gctgagcgggaagttgaattctcatccttcagggagatgcatgatgctcataaaactgga
tcttcagaacaaataaagtccttagaggaacatatcagcagcttgaaactcgaactagat
tcgtcaaaacaagagacagaaatcttgaaggagtccatgaaatctgcagaagaggaaaac
agctctctttctcagaaaatctcacaattgaacgacgatctaaaggcagcacatgataaa
gtggaagagcttgaagcagaggcgagtaactcgaaagaaaaattagctgagcgggaagtt
gaattctcatccttcagggagatgcatgatgctcataaaactagatcttcagaacaaata
aagtccttggaggaacatatcagcagcttgaaactcgaactagattcgtcaaaacaagag
atagaaatcttgaaggagtccatgaaatctgtagaagaggaaaacaactctctttctcag
aaaatctctcaattgaacgacgatctaaaggcagcacatgatagagcggaagagcttgaa
gcagaggcgaataactcgaaagaaaaattagctgagcgggaagttgaattctcatccttt
agggacatgcatgatgctcataaaactggatcttcagaacaatttaagtccctggaggaa
catatcagcaacttgaaactcgaactagattcgtcaaaacaagagacagaaatcttgaag
gagtccatgaaatctgcagaagaggaaaagaactctctttctcagaaaatctctcaattg
agcgacgatctaaaggcagcacatgatagagtggaagagcttgaagcagaggcgaataac
tcgaaagaaaaattagctgagcgggaagttgaattctcatccctaagggcaatgcatgat
gaacatgcaactggatcttcaaaacaaataaaggcattcgaggaacaaacgaatagtttg
aaactcgatttggagacattgatgggggtaaagagaaaattggaagaacagtttgggggt
aaagatgcagaagccagagagctgggtgaagaaataacagttttgaagggacagatttca
caaatggagatgatgtcaaaggagagagaagagtatatttcttctctccaggagaaacta
gaattttccgagaacgagtcaaatgtcagaactgaagcccttaattcccaagtaaatgaa
atcacacagcaaatagaaaagttgtgcactgagaaaagtcaactggaggaactgatagtt
acaaaaggcgacgaagcatcagctctgatcgaagaattgcaagaccagatcagctcattg
gaacatgaaatgaagactttacagattcaagaaaaagagatgaaattggatctcgagaga
aaagatgaggatattgcagcatatcggatgcaggtagaaggtttgcatgagaaattcact
agcagtgatgttcttctgaagctattttttgaagaaaaggaagccctgacagcccagttg
aaggaccgagatctggaagttgaaaagcttcacagccataaaactggactagaagagcaa
ttgaggacaaccagaaatgaggtgactcaactaagagaggagatagaaaagttgcaaacc
aggattcaagagctggagaagtcattgcaagagaaagaagaattgtcaactgctatgcag
aaaaggctcgaggatggggagaatgaagcatctttgaagatcacagccttaggggcagag
attgactatttgaagcaggagtctgaagaaattcgggccataaaaagccagttggaggct
cagattgagaaggagaaacaagaatatttagagggtctgaatctgctgcaaaccgagaat
gctgaactgaaagcacaaataggaaatcatctcaagacagtgaaggaattagaagatgaa
atgaacaacagaaaagagcagtgggaacagcttgaaagtcgtgttcaagcaagggagtcg
gagatccaagaagcagaaaggagaatcaaggaattaaaggaagaattgagcatgagttct
gaatcaaaagatgagaagattatagaacttgagttactagttgaaaacctgaaaaaagat
ctagaggtcgctacagatgaagaaaagactgcgtgggagaaaacccgcactattgaagta
cagcttcgcctaacaaaccaaaagttgaggatcacagaacaactactgatcgagaaagaa
gaggggtttagaattgcaaaggtgaaatatcaagaagaatgcaaagagctagaagatcaa
gtcacaaggctctctcaagtacttgctgctaataatgaagcttatcgcggaatgataatg
gacatttcagagcatatgaacagattgctagctgaaatgaagtccaccaccaagaagttc
gaggatgatcaagataagttttcaaatatcatcttcaatatgtcagaacaggttcaaatt
ctgaagcattgtgcagtggggaggaatgttgaaatatgcgagttaaaggatcagctaatc
agcgtcactgaacatttgagaaacgagaaggaacagagactaatgatgagtgataagatt
ggaaaactcgaagtcgagtttgacagtgaaaagggtgaaaaagaaaaattgtttgtagca
gtgagcgagctaaagaaggcaactggtgagatggatgttgcactaaaagagcaagaagag
cggctaactaccctaggggaagagaaacggcaagccattaggcagttgtgtttgtggtgt
gataatgtgcggatccaatatgaggagctgaagatgatggtctccaaagtgaatgcacag
agaagccagggtagatag
DBGET
integrated database retrieval system
