Amaranthus tricolor (tampala): 130801634
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Entry
130801634 CDS
T09367
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130801634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130801634
Enzymes [BR:
atri01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
130801634
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130801634
mRNA degradation factors
5'-3' decay
Decapping complex
130801634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
130801634
NCBI-ProteinID:
XP_057521496
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Position
15:complement(7247836..7264070)
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AA seq
331 aa
AA seq
DB search
MSGLHRSSSAPLKNALPPQELLDDLCSRFVLNVPKEDRQTFERILFLVEYAHWFYEDNTV
EKNPSLKSLTLKEFTTLMFNNCEVLKPYVPHIDDIFKDFTSYKFQVPVTGAIILDQTYER
CILVKGWKGSSWSFPRGKKNKDEDDHTCAIREVLEETGFDVSKLLAKDAYIELMFGKQRV
RLYIIAGVSDGASFAPLTKKEISEIAWHRLDDLQPASDEVISRSVTGLKLYMVTPFLKSL
KSWISKHAPHVASKSDAFHRGFSVWKSKNSSSGSSSALVDNQHTKLVSNPIVADTGPSDN
RVAETGPGKSFRNFRFDSRLIIQAMESGFSA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggcttcatagatcttcaagcgctccattgaagaatgctcttcctcctcaagaa
cttcttgatgatctctgcagtcgctttgtcctaaatgttcctaaggaagatcgacaaaca
tttgaaagaatcttgtttttggttgagtatgcacattggttctatgaggataatacagtt
gagaagaacccatctttgaaatcattgactttgaaggaattcaccactctaatgtttaac
aactgtgaggttttgaaaccctatgttcctcacatcgatgatatattcaaggacttcact
tcatacaagtttcaggttcctgtcactggcgcaatcattttggaccaaacgtatgaaagg
tgcatactagttaaagggtggaaaggaagcagctggagttttccaaggggaaaaaagaac
aaggatgaagatgatcatacgtgtgccatcagagaggttttggaggaaacaggattcgac
gtgtctaaacttcttgctaaagatgcgtacattgaattgatgtttgggaagcagcgggtg
cgcctctatattattgctggtgttagtgacggtgcttcttttgctccacttaccaaaaag
gagattagtgaaatagcttggcaccgactggatgatctccaacctgcaagtgatgaagtc
atatcacgtagtgtaactggccttaagctttatatggttactccgtttttgaagtcgttg
aagtcatggatttcaaagcatgcacctcatgttgcatcaaaatctgatgcttttcacaga
ggttttagtgtttggaagtcgaaaaatagctcttcgggaagcagctcagccttggttgac
aaccaacatactaaacttgtatccaaccccattgttgcagacacaggtcccagtgacaat
cgtgttgctgaaacaggccctggtaaaagctttagaaatttcagatttgattcgaggttg
atcatacaagccatggaatcgggcttttctgcataa
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