Amaranthus tricolor (tampala): 130801715
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Entry
130801715 CDS
T09367
Name
(RefSeq) high mobility group B protein 13-like
KO
K09273
upstream-binding transcription factor
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130801715
03021 Transcription machinery [BR:
atri03021
]
130801715
Transcription factors [BR:
atri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
130801715
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
130801715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF2028
KRAB
Motif
Other DBs
NCBI-GeneID:
130801715
NCBI-ProteinID:
XP_057521584
LinkDB
All DBs
Position
15:903572..908119
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AA seq
500 aa
AA seq
DB search
MATATASDLPMATNPIPAKKGKSRKALKEKNPSTNEANILAAKSTDQFDVPSIEPKSDLG
KENLENLSHSRSEKRKSKAKSKTKRVEVSNDFEKDLQEMQEMLEKLKIEKEKTEEMLKEK
DQILKKKEEEQQKLQLELKKLQKMKEFKPTMTLPINQSNKDPEKNDKKKKECPERKRPAS
AYALWCKDQWNEIKKENPDADFKEVSNLMGTKWKSLTPEDKKPYEEKYQSEKEAYLQIIS
KEKRETEALKLLEDEQKQKTAMELLNQYLEFMQEADKETKKTRKEKDPLKPKQPMSAYLM
YSKERQSDLLGEGNKLPEASKIIGEEWKNMSEEQKKPYEEIAKENKEKYLQEMEIYKQKK
EEEAASLKKEEEEFMKIQKVEALQLLKKKEKTENIIKKTKEMKKKKTKEEKNVDPNKPKR
PPSSFLLFSMEERKNLHQERPDANNFTINALISLKWKELNEEEKKIWNGKAAESMEAYKK
EMEEYNKQANKGEEAKKDSK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctacagcatccgatcttccaatggctactaacccgattccagctaaaaag
ggaaagagcagaaaagccttaaaagagaaaaacccatcaacaaatgaagcaaatattttg
gcagcaaaatcaactgatcaatttgacgtaccatcaattgaaccaaaatcagatctagga
aaggagaatcttgagaatctttctcattctaggtcagagaaaaggaaatcgaaggcgaaa
tcgaagacaaaaagagtagaagtgtctaatgattttgaaaaggacttgcaagaaatgcaa
gaaatgttggagaaattgaagattgagaaggagaaaactgaagaaatgttgaaggaaaag
gatcagattttgaagaagaaagaagaagagcaacagaagcttcagcttgagctcaagaag
ttgcagaaaatgaaggagtttaagcctaccatgactcttccaattaatcaatcaaacaaa
gatccagagaagaatgataagaaaaagaaggaatgcccagaaaggaaaaggccagcttca
gcatatgcattatggtgcaaagatcaatggaatgagatcaagaaagagaacccagatgca
gatttcaaggaagtttcaaatttgatgggaacaaaatggaagagtctcactccagaagac
aagaagccatatgaggaaaaataccaatctgaaaaagaagcttatttgcagattatcagc
aaagaaaagcgtgaaactgaagcattgaaactgctggaggatgaacagaagcagaaaact
gcaatggagttacttaatcagtacctcgaatttatgcaagaagctgataaagagaccaaa
aaaacaaggaaagagaaggatcctttaaaaccaaaacaacccatgtctgcatacttaatg
tactctaaagagaggcaatcagatttgcttggagaaggaaataaattgcctgaggcttca
aagatcattggtgaagagtggaaaaacatgtcagaagaacaaaaaaagccttatgaagag
attgctaaggagaacaaggagaagtacttgcaagaaatggagatttacaaacagaagaaa
gaagaggaagctgcaagtttgaaaaaagaggaggaagaatttatgaaaattcagaaagtt
gaggcattgcagcttcttaaaaagaaagaaaagactgagaatatcatcaagaaaactaaa
gagatgaagaaaaagaagaccaaggaggagaagaatgttgatccaaacaagcctaaaaga
cctccatcatccttccttctatttagcatggaagaaaggaagaatttgcaccaagagcgg
cctgatgctaacaatttcaccatcaatgcacttatttccttgaaatggaaggaactaaat
gaagaggagaagaaaatttggaatggcaaggcagcagaaagcatggaagcgtacaaaaag
gagatggaagaatacaacaaacaagctaacaagggagaggaagctaagaaagacagcaaa
taa
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