Amaranthus tricolor (tampala): 130801865
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Entry
130801865 CDS
T09367
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130801865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atri04040
]
130801865
Ion channels [BR:
atri04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130801865
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3382
Motif
Other DBs
NCBI-GeneID:
130801865
NCBI-ProteinID:
XP_057521776
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Position
15:8304812..8311917
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AA seq
724 aa
AA seq
DB search
MSPFSLHLPKILPATFRNSETGANPENSPTNVGQNGSHVSSNGTSSISTDQDDTNFYNGN
WSNPIECYACTQVGVPVFHSTSCDRADQPEWEASAGSSLYPTRTHHNHKRSPMGRPMSLF
GVIVDPRSERVRRWNRVILIARAVALAVDPVFFYALSIGRGGSCLYMDGVVAAVVTMIRT
GVDAVHLWHVWLQFRLAFVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDLYVILPIQ
QVVLWSVVPSLLRQDKIQILMTILLLIFLFQFLPKAYHSLYLMRKMQKVTGYIFGTIWWG
FGLNLVAYFIASHVVGGCWYILAIQRVAACLSQQCNRIRKCNMSLSCAKGICYQFLQQPS
TIERCGANSTMPRKSFCLDDDGPFSYGIYSSAVPVISSNAIIIKILYPISWGLFQLSTFG
NNLTPTSQWAEVLFCMCLVLGGLMLFTLLIGNIQVFLHTVMAKKRKMQLRCRDMEWWMRR
RQLPSRLRHRVRHFERQSWLTTGGVDEMELIKDLPEGLRRDIKRYLCLDLMKKVPLFRCL
DDLILDNICDRVKPLIYCKEEKIMREGDPVQRMVFIVCGRIKSEQTLSKGMVAKDILGAG
AFLGDELLSWSLRRPFLHRLPASSATLECLEPTEAFGLDAYDLHYITEHFRYKFANESLR
RTLRYHSSIWRTWAAVNIQFAWHRYVKRTRGLVPNVDSRNGDNEKRLLQFAAMFMSIRPH
DHLD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccttctctctccatctccccaagattctaccagccacatttagaaactcagaa
acaggggcaaacccagaaaatagtcccacaaatgtaggacaaaatggaagccatgtcagc
agtaatggaacaagtagtattagcactgatcaagatgatactaatttctacaatggaaat
tggagtaacccaattgaatgttatgcatgcactcaagtgggtgttccagtattccactct
acaagctgtgatcgtgcagaccaacccgaatgggaagcttctgcgggctcctccctttac
ccgacccgaacccatcataatcataagcgttctccaatgggtcgacccatgagcttattt
ggggtgatagtagacccgaggagtgaacgggtacggaggtggaatcgggtcatacttatt
gcacgtgcggtagcattagcggttgatccggtgtttttctatgctttgtcaattgggaga
ggaggttcatgtctttatatggatggagtggttgcggctgtggttacgatgattcgcacg
ggtgttgatgcggttcatttgtggcacgtgtggcttcagttccggttggcgttcgtgtcg
agggaatcattggtggttgggtgtgggaaacttgtgtgggatgcacgtgcgattgcttcg
cattatgtacgttctttgaaaggtttttggtttgatctctatgtcattcttcctattcaa
caggttgtactatggtccgttgtaccatcgttgctccgacaagataagatacaaatcttg
atgacaatactactccttatttttctgtttcaattcctacccaaagcttatcacagcctc
tatctaatgaggaaaatgcaaaaggttacaggatacatatttggtaccatttggtggggt
tttggacttaatctcgttgcttactttatcgcttctcatgtcgtaggaggatgctggtat
attcttgcaatacagcgcgttgcagcttgcctgtcgcaacaatgtaataggatccgaaag
tgtaatatgtctttgtcttgcgcaaaagggatttgctaccagtttctgcaacaacctagt
acaatcgaacgatgtggggccaattctacaatgccccgaaaatccttttgcttggatgat
gatggcccttttagttatggcatttatagttctgctgttccggttatttctagcaatgcc
atcatcattaagattttatacccgatttcttgggggttattccaactcagcactttcggt
aataatctaactccgacaagccaatgggcggaagttttgttttgtatgtgtctcgttctt
ggcggtttaatgctcttcactctgttgataggaaacatccaagtgtttctgcataccgtg
atggcaaaaaagagaaaaatgcagttgagatgtcgagatatggaatggtggatgaggcgg
aggcaattgccttcgcgtttgagacatagagttcgtcattttgaacgtcagtcttggttg
actacaggaggagttgatgagatggagttaatcaaagacttgcctgaagggcttcgtcgt
gacatcaaacgctatctttgtcttgatctcatgaaaaaggttccactatttcgctgctta
gatgacttgatcctagacaacatttgcgacagagtaaaaccgttgatttactgcaaagaa
gaaaagataatgagagaaggagatccagtgcaaaggatggtgttcatagtttgcgggcga
ataaaaagcgagcaaactctaagcaaaggcatggtagcaaaagacatacttggagcagga
gcgttcctaggcgatgagctcttgtcttggagtcttcgaaggccattccttcatcgactc
ccagcttcatccgcaacattagaatgtcttgaaccaacagaagctttcggacttgatgca
tacgacctacattacatcaccgagcattttcgttacaagtttgctaacgaaagccttagg
cgaactttaaggtaccattcctctatttggaggacttgggctgccgttaatatacaattt
gcttggcatcgttatgtgaagaggactagaggtttagtccctaatgttgattcacgtaat
ggagataacgaaaaacgtcttcttcagtttgctgccatgtttatgtccattagacctcat
gatcaccttgactag
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