Amaranthus tricolor (tampala): 130802254
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Entry
130802254 CDS
T09367
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
atri
Amaranthus tricolor (tampala)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-GeneID:
130802254
NCBI-ProteinID:
XP_057522173
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All DBs
Position
16:1690949..1702374
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AA seq
1389 aa
AA seq
DB search
MNITETLNLTLKSSDLYLQIKNSLSPLSISSLPPFPPNFPISKLIPKTRFIIDGFRNSGD
FSFTYFLSHFHADHYTGLTSSWSRGIIFCSQITAKLVIEVIGVQSDFVYPLPMNETVLID
GCEVTLIDANHCPGAVQFLFKVPLNGGKFERFVHTGDFRFCSDMKLLPVLSNYVGCDAVF
LDTTYCDPKFVFPVQDESIDYVVSVIERFGSENRNARKSVLFLVATYVIGKERILVEIAR
KCRCKVYVDSRKMTILRALGYENEDVFTEDESASDVHVVGWNVLGETWPYFRPNFVKMKE
IMVEKEYSKVVGFVPTGWTYEVKRTKFSVRKKDSFEIHLVPYSEHSNYNELREYVKFLKP
KCVIPTVGSDVENVDSKHAIKMRKHFAGLVDEMANKQEFLMGFYRVTDRKEIVEVGDSVI
ELDKGVEQLKDACDVKQDHNSGSVSMCSTAVMCEPGSEESASLCDKEKDEILQELQDCLP
NWISVNQMLELVKIFGRNTVDAVSYFYEHETEFYEECGKPVLPCQSNLKTDCTTSSNHIL
EESTSEKLVKSPKQSLKFLPLKQSVVCSGSPVKRKRNPENKHNKKGKVNPNAEPGGIKQS
TITKFFSKSSGVVSPASIAPPLSGTCSEEKRSSPVHSSKLYEEELKKFIQVVEGSELMKS
YAAELMEKARGNIDMALDMHYSNSEVSHGGNQKSLNVSSISATCEVPEASLSSQGQERSE
AGDKVYKSVQESLADNMAANYVSLPPEKYSPIEHACWKQGQPAPYLHLARTFDLVEGEKG
KTKATSMLSNMFRSLVALSPEDVLPAVYLCTNKIAADHENMELNIGGSLVASALEESCGT
NRSKIREMYNNLGDLGDVAQECRQTQSLLVTPSPLLIRDVYSTLRKISVQKGNGSTSRRK
SLIISMMRSCREKEMKFIVRTLVRNLRIGAMMRTVLPALAQAVALNSYDEEAGKNLKQLL
QGLSTAAIEAYNILPDLNLLVPSLMSKGIEFSASTLSMRPGVPIRPMLAKITNGAPQLLK
IFQDKAFTCEYKYDGQRAQIHKLADGSVRIFSRNGDETTSKFPDLVNIILELCNPCAESF
IIDAEVVGIDRKNGHKFLSFQELSARERGSKDSLVSLDRIKVDICILAFDAMFVNGEKLL
DSPLRQRRQRMKDLFCREKPGFFEYAKEITVEADEALPDSEDALKKINIFLEDAFKSSCE
GIMVKSLDVDAGYYASKRADSWLKVKRDYMDGVGDSLDLVPIGAWYGNGRKAGWYSPFLM
ACYNPDSEEFESLCRVMTGFTDVFYKEMKGFFSGDKILPQKPLYYRTDEIPDVWFSAETV
WEIKGADLTVSPVHKAGVGIVHPSRGISMRFPRFIRSLSDRRPEDCSTSTDVSEMFHSQT
RKMDVSGVH
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcactgaaaccctaaacctaaccctaaaatcctctgatctctatctccaaatc
aaaaattcgctttctccgttgtccatttcgtctcttcctccatttccccctaatttccca
atatcaaaactcattccgaaaactcgtttcatcatcgatggcttccgaaattcgggagat
ttttcattcacctactttctctcgcactttcatgccgatcactacactggtctcacttcc
tcgtggtctcgcggcatcattttttgttctcaaatcaccgcgaagctcgtcattgaagtt
attggagttcaatcggattttgtttatccgttaccgatgaatgaaactgttttaattgat
ggatgtgaggtaactttaattgatgctaatcattgtcctggtgctgttcaatttttgttt
aaagttcctcttaatggtggtaaatttgaacgttttgttcataccggcgattttaggttt
tgtagtgatatgaaattattgcctgttttgagtaattatgttggttgtgatgctgttttt
cttgatacgacctattgtgatcccaaatttgtgtttcctgtgcaagacgagtctattgat
tatgtcgttagtgtgattgagaggtttgggagtgaaaatagaaatgcgaggaaaagtgtt
ttgtttcttgttgcgacttatgttattggaaaagagaggattttggtggaaattgcgcgt
aagtgtaggtgtaaggtgtatgtggatagtaggaaaatgacgattttacgtgcattggga
tatgagaatgaggatgtgtttacggaagatgagtcggctagtgatgttcatgttgtaggg
tggaatgttttgggggagacttggccgtattttcgacctaattttgtgaagatgaaggaa
attatggtcgagaaggagtattcaaaggttgtggggtttgttcctactgggtggacttat
gaagtgaagaggactaagttttctgttaggaagaaagattcgtttgagattcatctagtg
ccttacagtgagcattcaaactataatgagcttagagagtatgtcaagtttttaaagcca
aagtgcgtgatccctacagtgggctctgatgttgagaatgtagatagcaaacatgctatt
aagatgcgaaaacattttgcaggattagtggatgaaatggctaacaagcaagagtttttg
atgggtttttatcgtgtaactgacagaaaagaaatagttgaggtgggtgattcggtgatt
gaattggacaagggtgtagaacaactaaaagatgcgtgtgacgtgaagcaagatcataat
agtggttcggtttctatgtgttctacagctgttatgtgcgaaccaggctcagaagaatct
gcttctttatgtgataaagaaaaagatgagatcttgcaagagcttcaggactgtttgccc
aattggatatctgtaaatcaaatgctagaacttgttaaaatattcggtagaaatactgtt
gatgctgtttcttatttttatgaacatgaaacggaattttatgaggagtgtgggaaacct
gtcctaccgtgtcagtcaaatttgaaaactgattgcacaacgtcttcgaatcacattctt
gaggagagcacttctgaaaaacttgtgaagtcaccaaagcaaagcctcaaatttctgcca
ttgaagcagtcagttgtttgcagtggctccccagttaaaaggaagaggaacccagagaat
aagcacaataagaagggaaaagttaatccaaatgctgaacctggtggcataaagcaatct
acaataaccaagttcttcagtaaaagtagtggagtagttagtcctgcaagcattgctcct
cccttgtccggcacatgctctgaagaaaaacgttcatctcctgtacattcctctaagctt
tacgaggaagagttgaagaaatttatacaggttgtggaaggcagtgaattaatgaaaagt
tacgctgcagaacttatggaaaaggccagaggaaatattgacatggcactggacatgcac
tatagcaattctgaggttagtcatggtggtaatcagaaaagtctgaatgttagtagcata
tcagcaacatgtgaagttccagaggctagcctctctagccaagggcaagaaaggtctgaa
gctggtgataaagtttataaatctgtgcaagaatcgttggctgacaacatggctgctaac
tatgtatcactaccacctgagaagtattctccgatagaacatgcttgctggaagcaaggt
cagcctgctccatatttacacttggcacggacttttgatcttgttgaaggtgaaaaggga
aaaactaaagctacctctatgctttcaaatatgtttagaagtttggtggctttgtctccc
gaggatgttcttcctgctgtttatctctgcacaaataagattgctgctgaccatgaaaat
atggaactaaacattggcgggagtttggttgcatctgctcttgaagagtcatgtggaacc
aatagatcaaagataagagaaatgtacaacaatcttggtgatcttggggatgttgcacaa
gagtgtcggcaaacacagtcgctgcttgtcactccttcaccccttttgattcgtgatgtt
tattctacacttcgaaaaattagcgtacagaaaggcaatggaagcacaagtagaaggaaa
agcctcattatcagtatgatgcgatcttgcagagagaaggaaatgaagttcattgtcagg
actttggtgaggaacctacgaattggagccatgatgagaacagttcttccagcattggct
caagcagtggcactgaatagttatgatgaagaagctggcaaaaatctgaagcaattgctt
cagggcctttctacagctgctattgaagcttataatattcttccggacttgaatttgctc
gtgccttctcttatgagcaaaggcatagagttttccgcctctacattgtctatgcgacca
ggtgttcctattaggcccatgcttgctaaaataactaatggggctccgcaattactgaaa
atattccaggataaagcctttacttgtgagtacaagtatgatggtcaacgtgcacaaatt
cacaaactcgctgatggttctgtgcgcatcttctcaagaaatggggatgagacaacttca
aaatttccagatttagtgaatattattctggagttatgtaatccttgtgcagagtctttc
attattgatgcagaggtggttggaattgatcgaaaaaatggacataagtttttatccttt
caagagctatctgctcgagagagaggaagcaaagattccttggtttcattggatagaatc
aaggttgacatctgtattcttgcatttgatgccatgttcgtcaatggagagaagttattg
gattccccacttaggcaaagacggcagcgtatgaaagatctcttttgtcgagagaaacca
ggtttttttgaatacgcaaaggaaataactgtagaagcagatgaagctcttccggacagt
gaagatgctttgaaaaagataaatattttcctggaagatgcgtttaagtcttcttgtgaa
ggaattatggttaagtcactagatgttgatgctggttactatgcttcaaaacgtgctgat
tcatggttgaaggtaaagcgagattatatggatggggtaggggactcccttgatttagtc
cccattggtgcctggtatggtaatgggagaaaggcaggatggtatagtcctttcctaatg
gcatgttacaatcctgattccgaggaatttgaaagcttatgccgtgtaatgaccggattt
accgatgttttttacaaagagatgaagggttttttctctggagacaagatcttgccccaa
aaacccttatattaccggacagatgaaattcctgatgtgtggttttcagctgaaacggta
tgggagataaaaggtgcagaccttactgtatcaccagttcacaaggctggtgttggaatc
gttcatccttcacgaggtatttcaatgaggtttccgagatttatacgttctctctcagac
agacgaccagaagattgtagtacatcgacagatgtttctgaaatgtttcattctcagact
cggaaaatggatgtaagtggtgttcattag
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