KEGG   Amaranthus tricolor (tampala): 130802327
Entry
130802327         CDS       T09367                                 
Name
(RefSeq) ESCRT-related protein CHMP1A
  KO
K12197  charged multivesicular body protein 1
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03272  Virion - Hepatitis viruses
atri04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    130802327
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130802327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130802327
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atri04147]
    130802327
Membrane trafficking [BR:atri04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    130802327
Exosome [BR:atri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130802327
  Exosomal proteins of other body fluids (saliva and urine)
   130802327
  Exosomal proteins of colorectal cancer cells
   130802327
SSDB
Motif
Pfam: Snf7 Ist1 DUF3886
Other DBs
NCBI-GeneID: 130802327
NCBI-ProteinID: XP_057522271
LinkDB
Position
16:2447527..2454671
AA seq 204 aa
MGNTEKLMNQIMELKFTSKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIR
KRTEQMNYLRLASRLDAVVARLDTQAKMQTIGKSMGSIVKSLESSLNTGNLQKMSETMDQ
FEKQFVNMEVQAEFMESSMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAGHAIA
APKASEKVDEDDLTRRLAELKARG
NT seq 615 nt   +upstreamnt  +downstreamnt
atggggaacactgagaagcttatgaaccaaatcatggagcttaaattcacctcgaaatca
ctccaacgccaagctcggaagtgcgagaaagatgagaaatccgagaaactcaaagtcaag
aaagcaattgagaaaggaaacatggatggagcacgaatttatgccgaaaatgcaattcgt
aagcgtactgaacaaatgaattaccttcgtcttgcttctcgtctcgatgcggttgttgct
cgacttgatactcaagccaaaatgcaaacaattggaaaatctatgggatcgattgtgaaa
tcgcttgaatcttcgttgaatactggtaatttgcagaagatgtcggaaaccatggatcaa
tttgagaagcagtttgtgaatatggaggttcaagcggagtttatggagagttcgatggct
ggaagtacatcgctctcgactcccgagactgaggtgaatagtttgatgcagcaggtggcg
gatgattatggtttagaggtttctgttggtttgcctcaagctgctggacatgcaattgct
gctccgaaggcatcggagaaggttgatgaggatgatcttacgaggaggctcgctgagctt
aaagctcgaggttga

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